Papaver somniferum (opium poppy): 113356421
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Entry
113356421 CDS
T05758
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113356421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113356421
03036 Chromosome and associated proteins [BR:
psom03036
]
113356421
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113356421
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
113356421
PBAF complex
113356421
GBAF(ncBAF) complex
113356421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
NPR3
DUF7685
Importin_rep_6
Autophagy_act_C
DUF555
Motif
Other DBs
NCBI-GeneID:
113356421
NCBI-ProteinID:
XP_026455330
LinkDB
All DBs
Position
3:69078156..69083331
Genome browser
AA seq
802 aa
AA seq
DB search
MSAQLSFPSGGNNNSKWKKRKRDNNTTNNNSNSNSNNSTPNTKKHRQQQQSDDEDEEDIN
EDDEEEIEPEIEEDEDLQPIPSVTPPIVQNPKEEVLSDGGVRISDFPIVVQHTVNRFHSS
VLSIVSAERQAEFPNNQNPNPNFFLIENISHGQLQALSSVPADNLSLATTSDLNDRSDAA
ASYVCTPPAIMEGPGVVKRFDGRALVVPMHADWFAPNTVHRLERQVVPFFFSGKSADHTP
EKYMECRNRVVANYMDNPETRLWTGDCQNLVDGVDVHDLNRIVRFLDHWGIINYSAPAPN
RDPRIGGPFLREESNGEIHIPSSALRSIYSLIHFDKPKSRIKPTDMCPMLSYGGGDEVAD
LEQRIRERLTENHCHYCSQPLPRVYYQSQKESDILLCSDCFHEGRFVVRHSSIDFMKADS
AKALCDLDGDSWTDQETLLLLEAVEVYHDNWNDIAEHVGTKSKAQCILHFVRLPMEDVVL
ENIDVPSKLVSSNTPNLEDGGTPYPRSNGDSARLCLQDPDSESRLPFANSRNPVMALVAF
LASAVGPRVAAACAHASLAELSKEENQLVASENQAVQDGTNALSSAPLSTQSVKVAAKVG
LAAAAMKAKLFADHEEREIQRMAASIINHQLKRLELKLKQFAEVETLLMKEGEQVEKARQ
RLAAERVHIISTRFAPGGALNANTATLQGAVAGSVGNNLVNSSRQVGMPGGLPVQTNMIP
GGYGNNSGVATHPHMSFMPRQPMFSYGPRLPLSAIHPSSSQPSSAAHPGNTMYNAAAPPG
NAPSTLGHAMLRPVPGNNANVG
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctcaactctccttcccttcaggaggaaacaacaacagcaaatggaaaaagaga
aaaagagacaacaacaccaccaacaacaacagcaacagcaacagcaacaacagcactcct
aacaccaagaaacacagacaacagcaacaatcagacgatgaagatgaagaagacatcaac
gaagacgatgaagaagaaattgaaccagaaatcgaagaagatgaagatttacaaccaatt
ccttctgtaacaccaccaattgttcaaaacccaaaagaagaggttctttcagatgggggt
gtaagaatatcagatttccctattgttgtacaacatactgtaaatcgctttcattcttct
gttctttcaattgtttctgctgagcgtcaagctgaatttcccaataaccaaaaccctaac
cctaatttcttcttgattgagaatatatctcatgggcaacttcaggctctgtcatctgtt
ccagctgataatctttctttagctactacatctgatcttaatgaccgatctgatgctgct
gcttcctatgtttgcacacctcctgctattatggaaggtccaggtgttgttaagcgattc
gatgggcgagcacttgtcgtccctatgcacgctgattggtttgcaccaaacacggtgcac
agattggaaaggcaagtggttccgttttttttctctggaaaatctgctgatcatacaccg
gaaaagtacatggaatgccgcaatcgagttgttgctaactatatggacaatccagagacg
agactttggacaggagattgccaaaatttggtcgatggtgttgatgttcacgacttgaat
cgaattgttcggtttctagatcactggggaataattaattacagtgcaccggcaccaaat
cgtgaccctaggattggtgggccatttttaagggaggaatcgaacggggaaattcacata
ccatcgtctgcattgaggtcgatttatagtttgattcactttgacaagcctaagagtagg
atcaaacctactgatatgtgccctatgttgtcgtatggtggtggtgatgaggtagctgac
ttggaacagagaatccgggagaggttaacagaaaaccattgccattactgctctcagcca
ttgcctcgtgtttactatcagtcacagaaggaaagtgatatactgctttgctctgactgc
ttccatgaagggagatttgtcgttaggcactcgagcatagattttatgaaggcggattct
gcaaaagctttatgtgatcttgatggggatagttggactgaccaggaaacactattgttg
cttgaggcagtcgaggtctaccatgataattggaatgacattgcagagcatgtaggcacc
aagtccaaggcccagtgcattcttcattttgttcgtctcccgatggaggatgttgtttta
gaaaatattgatgttccgagtaagttggtctcatccaacacgccgaatttagaagatggg
ggaacaccatatccaagatctaacggagattctgcaagactttgtctccaagatcctgat
tctgaaagcaggcttccatttgcaaattctaggaatccagtcatggcccttgttgccttt
ctggcctctgcagtagggccaagagttgccgcagcctgtgcacatgcatcattagcagaa
ttgtccaaggaggaaaaccagctagttgcttctgaaaatcaggccgtacaagatggaact
aatgctctttcctctgctcctttgtccactcaaagtgtaaaagttgctgcaaaagttggc
ctagctgcagctgcaatgaaagcaaaactgtttgcagatcatgaggagcgcgaaatacag
agaatggcagccagtataattaatcatcagctaaagaggctcgaactgaagctgaagcag
tttgcggaagtggagaccttgctgatgaaagaaggcgagcaagtagaaaaggcaaggcag
cggctagcagctgaaagagtccatatcatatcaacgcgttttgcacctgggggtgccttg
aatgccaatactgctactttacagggtgcagtggctggttctgtgggaaataatcttgtt
aacagcagcagacaagtaggtatgccaggtggtttgcctgtgcagacaaacatgattcct
ggaggatatgggaacaattcaggggtggctacacatccacacatgtcattcatgccgcga
cagcctatgttttcttatgggccacgcttacctctctctgcaatacatccatcatcatca
caaccctcatctgctgcacacccaggtaataccatgtacaatgctgccgccccgccaggc
aatgcaccctctactcttggccatgcaatgttaagacctgtccctggtaataatgcaaat
gtaggttga
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