Papaver somniferum (opium poppy): 113356462
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Entry
113356462 CDS
T05758
Name
(RefSeq) F-box protein SKP2A-like isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113356462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113356462
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
113356462
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
113356462
NCBI-ProteinID:
XP_026455389
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Position
3:71639028..71643165
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AA seq
384 aa
AA seq
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MVEGIVAQDLDMCFQNLVMVGVEGGGKMMMNNWKDLPMELLLRILSLVDDRTVIVASGVC
TGWRDAVCLGLVSLNISWCKNNMNNLLLSLAPKFTKLQTLSLRQSTPQLEDNSIEAIASW
CHDLTDLDLSKSLKLTDSSLYAVAHCCPLLTKLNISGCPTFGDAALAYLTSFCKNLKSLN
LCGCVKAASDRALQAISYNCSQMQYLNLGWCDSVTDAGVTSLAFGCPDLRSLDLCGCVLI
TDESVIALASKCIHLRSLGLYYCQNITDKAMYSLANSRSKSSTVKRDNDLWESVKSSSTS
SNSSQSRYKNDEEGLEKLNISQCTALTPPAVQAVCDSFPSLHTCAGRHSLIISGCLNLTS
VHCLCALQARRVATSNLTSHPHAH
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaggaatagtagctcaggatttggatatgtgttttcaaaaccttgtgatggtt
ggagtagaaggtggtggaaagatgatgatgaataattggaaagatcttccaatggagctt
ctattgaggattctttcgcttgtggatgatcgtacggttattgtagcttcaggagtgtgt
actggttggagagatgctgtttgcttgggtcttgtgagtctcaatatctcatggtgcaaa
aataacatgaacaaccttttgctgtcactagcgcccaagttcacgaagttacagactcta
tccttgcgccaaagtacaccccaacttgaggataactctattgaggctatcgcgagctgg
tgtcatgatcttacagacttggatcttagcaaaagcctcaagcttactgatagctccctg
tatgcagtagcccattgctgtcctctactgactaagcttaacatcagtggttgtccgacc
tttggtgacgcggctcttgcgtatctgactagtttctgcaagaacttgaaaagcctgaac
ctctgtgggtgtgtgaaagctgcatctgacagagccctgcaggctatttcatacaattgc
agccaaatgcagtatttgaaccttggatggtgcgacagtgttactgatgcaggagtgacg
agtttagcatttggatgcccggatcttaggtcgttggacttgtgtggctgcgtccttata
acagatgagagtgtgattgctttggcgagtaagtgcattcatttgagatctcttgggtta
tactactgccagaacattacggacaaggcaatgtattctctagccaacagccgatctaag
agcagcactgtgaagcgtgataatgatttgtgggagtctgtcaaaagcagcagtaccagt
agtaacagtagccaaagcaggtacaaaaatgacgaagaggggttggaaaagctaaacatc
agccagtgtactgctctcactcctccagctgttcaggctgtttgtgactcgttcccttct
ctccatacctgcgctgggcggcattccctcattatcagtggctgtcttaacctaacatct
gttcactgtttatgtgctctccaagcacgtcgtgttgctaccagcaatcttacttctcat
cctcatgctcactag
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