Papaver somniferum (opium poppy): 113356473
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Entry
113356473 CDS
T05758
Name
(RefSeq) tyrosine--tRNA ligase 1, cytoplasmic-like isoform X1
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
113356473
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psom01007
]
113356473
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psom03016
]
113356473
03029 Mitochondrial biogenesis [BR:
psom03029
]
113356473
Enzymes [BR:
psom01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
113356473
Amino acid related enzymes [BR:
psom01007
]
Aminoacyl-tRNA synthetase
Class I (A)
113356473
Transfer RNA biogenesis [BR:
psom03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
113356473
Prokaryotic type
113356473
Mitochondrial biogenesis [BR:
psom03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
113356473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
MRP-L27
Motif
Other DBs
NCBI-GeneID:
113356473
NCBI-ProteinID:
XP_026455409
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All DBs
Position
3:complement(72240342..72245767)
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AA seq
398 aa
AA seq
DB search
MADEINISSVSLDGNQEGSTSAASNPEGTQSSLPLEERYRIVRSIGEECIQEEELMRLLA
NKPEPICYDGFEPSGRMHIAQGVVKAINVNKLTDCGCRVKIWIADWFAQLNNKMGGDLAK
IKVVGQYLIEIWKAVGLRNLDKVEFLWSSDEINSRAAEYWPLVMDIARKNNLARITRCCQ
IMGRSDQDELTAAQILYPCMQCADVFFLKADICQLGMDQRKVNVLAREYCDSIKRKNKPV
ILSHHMLPGLQQGQEKMSKSDPSSSIYMEDEEAEVNVKIKKAYCPPKIVAGNPCLEYIKY
IIFPWFGVFEVQRQEKNGGNKTYESMEELIADYENEELHPADLKPALSKALNKILKPVRD
HFANDPNAKALLKKVKDYQKLNKFVLPSAELQSNKVML
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgaaatcaacatctcgtcggtgagcttggatggaaatcaagagggttcaact
tcagccgcttcaaatcctgaaggaactcagtcgtcgttacccctagaagaaaggtacagg
atagtaaggagtattggtgaagaatgtatccaagaggaagagctgatgaggttgcttgct
aataagcctgaacctatatgttatgatggttttgaaccctctggacggatgcacattgca
cagggtgttgtgaaggcaataaatgtgaataagttgacagactgtgggtgcagggtcaaa
atatggattgctgattggtttgcccagctaaacaataaaatgggtggtgacttggccaaa
attaaagttgtcggtcaatatctgattgagatttggaaggctgtaggcttgagaaatctt
gacaaggtggagtttttgtggtcttcagatgaaataaattcacgtgcagctgagtactgg
cctttagtgatggatatcgctcgtaagaacaatctggcaaggataactaggtgttgtcaa
ataatgggtcgcagtgatcaggatgagttgactgctgcccagattttatatccttgtatg
caatgtgctgatgtctttttcctaaaggctgacatctgccagctgggtatggatcagcgc
aaggtgaatgtacttgctagagagtactgcgactctatcaagagaaagaacaagcctgtc
atcttgtcacaccacatgctacctggactgcaacaaggccaggagaagatgtcaaagagt
gacccatcgtcctccatttacatggaagatgaagaggctgaagttaacgttaagatcaag
aaggcatactgtcctccaaagattgtggcagggaacccatgtttggaatacataaaatac
atcattttcccgtggtttggggtgtttgaagtacaacgacaggaaaaaaatggggggaat
aagacctatgaaagcatggaagaactaattgctgactatgaaaatgaggaactgcatcct
gctgatctcaagccagctctttcaaaagctttgaataagatcttgaagcctgttcgtgat
cacttcgctaacgaccctaatgcaaaagcgctattgaaaaaagtgaaggattatcagaaa
ctgaacaaatttgtgttgccttctgcagagctacagagtaacaaagtgatgctctag
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