Papaver somniferum (opium poppy): 113356705
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Entry
113356705 CDS
T05758
Name
(RefSeq) pre-rRNA-processing protein TSR1 homolog isoform X1
KO
K14799
pre-rRNA-processing protein TSR1
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psom03009
]
113356705
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
113356705
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Tsr1_G-like
Motif
Other DBs
NCBI-GeneID:
113356705
NCBI-ProteinID:
XP_026455702
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All DBs
Position
3:complement(84513182..84521436)
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AA seq
717 aa
AA seq
DB search
MPSAQKNKSHKSSKSSRNSLRKKSGIDIKGNRIGKSDHHVGKGSKAARFHHTKMVRCRKR
ASLLEEKRASIGSGTSPLVIVLFGLTASVNVRGLKEQLIRLLSPGDANKTTVASPHYKIR
ATVLEAPHGDLSTCMELAKVADLIAFVASARSSSKEVDTCSYIDSFGSQCLSVFKALGLP
STAVLIRDLSLDLKKRNDMKKTCMSSLTSEFPDSKFYPADTTEELHKFMWLLKEHRLTVP
IWRSQRPYLIAHEVDLIVNDGSPGLCTLLLSGYLRAHDLSVNQLVHVSGSGDFQMSKIDV
LQDPNPLKSGTGQDLMDSDEHHGTQIIHSLFPDLSKQQSLVIENDPKPDPGEHTWPTEME
MTKADEYQRRSMINTYKNQATEFFEGKDNQDSGSDCFHVEDQEDYSDEDVDADTVMEEDE
DITKEMIRDEIRKIHDAQAEDEEYPDEVDTPLDVLARVRFGKYQGLKSFRTSVWKDKNPP
PREYARIFSFHNYKATQKCVLENARDIGQRTLDECIPVGSYARIHVKDVSVSVALRLCSL
VKSKPVVASGLLEHESKMSVLHYSIKKHKSYQFPVKRKESLIFHVGFRQFVARPIFSLDS
INSHQHKMEKFLHEGRFSIASVYAPISFPPSPLKALKRGRDGEVGFPSVAAIGSLKSIDP
ERIILKKITFTGYPRRVSKLKATVRYMFHDPIDVAAKSGQRTVFVVTLKNLLVHMER
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcagctcaaaagaacaagtctcataaatcgagcaaatcatctcgtaatagcctt
cgtaaaaagtctggaattgatattaaagggaacagaatcgggaaatcagatcaccatgtc
ggaaaagggtctaaagctgctcgatttcatcacaccaagatggttcgatgtcggaaaaga
gcttccctattggaagagaaacgggcttccatcggttcaggaacttcccctctagttatt
gttctttttggacttactgcatctgtaaatgttagaggactcaaagaacaactcataaga
ttactatctccgggagacgcaaacaaaactactgttgcttctccacactacaaaatcaga
gcaactgtcttggaagcaccccatggcgatttatcaacttgcatggaactcgccaaggtt
gcagatttgattgcttttgtagcgtcagcccgctcgtcgtccaaagaagtcgatacttgc
tcttatattgattcattcggaagccaatgcctatctgtctttaaagcgcttggtttgcca
agcaccgctgttttaattcgtgatctatctctagatctcaagaaaagaaatgatatgaag
aagacatgcatgtccagcctcacatctgagtttcccgattctaagttctatccagcagat
acaacagaggagctgcataagttcatgtggctccttaaggagcaccggctcactgtacct
atttggcgaagtcaacgcccttaccttattgctcacgaggttgatttgatagtcaatgat
ggaagtcctggactctgtacccttctcctctctgggtatttgcgagcacatgacctttca
gtgaaccaattggttcatgtgtcaggttcaggtgacttccagatgtcaaagatagatgtt
ctccaggatcccaatcctttgaaatcagggacaggtcaggatttgatggactcagatgag
caccatggtacacagatcattcactctttatttcctgatctgtcaaagcagcagtcttta
gtcatcgaaaatgatcctaaacctgatccaggggaacatacttggccgacagagatggaa
atgactaaagcagatgagtatcagagacgaagcatgattaatacctataagaaccaggct
actgaattttttgagggtaaagataaccaagactcagggagtgattgcttccacgttgaa
gaccaagaggattattcagatgaagatgttgatgctgatactgtgatggaggaggatgag
gacatcacgaaggaaatgattcgagatgagattcggaagatacatgatgcacaggcagaa
gatgaagaatacccagatgaagtggatacccctttagatgttttggctcgagtgcgtttt
ggcaagtaccaaggtctcaaatcttttcgaacttctgtgtggaaagacaagaatcctccg
cctcgtgaatatgctagaatcttttcattccataactacaaggcaacacagaaatgtgtg
cttgaaaatgccagggacatcgggcaacgtactttggatgagtgcattcctgttgggtct
tacgcaaggattcatgttaaggacgtatcagttagtgttgctttaagactctgttctttg
gtgaagtcaaagcctgtggttgccagcgggcttttggagcacgagtccaagatgtccgtt
ctccattatagcataaagaaacacaagtcgtaccaatttcctgtaaaacgaaaggaatct
cttatttttcatgttggatttaggcaatttgttgctaggccgatattttctttagatagc
ataaactcgcatcagcacaaaatggaaaagtttttgcacgaaggacggttttcaattgct
tctgtatatgcaccaatttcttttcctccttcacccttaaaagccttaaagagggggcgg
gatggagaagttggcttcccttctgttgctgctatagggtcactaaagagtatcgatcca
gagaggattatacttaagaaaatcacatttactggttaccctcgaagggtgtctaagcta
aaagctacagtgcgctatatgtttcacgatcccatagatgtcgctgcgaaatctggacaa
agaacggtgttcgtggtaacattaaagaatctgttggtacacatggaacgatga
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