Papaver somniferum (opium poppy): 113356711
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Entry
113356711 CDS
T05758
Name
(RefSeq) pre-mRNA-processing protein 40A-like
KO
K12821
pre-mRNA-processing factor 40
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113356711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113356711
Spliceosome [BR:
psom03041
]
Complex A
U1 snRNP components
U1 related factors
113356711
Complex B
113356711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
FF_RHG35_4th
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
113356711
NCBI-ProteinID:
XP_026455709
LinkDB
All DBs
Position
3:complement(84917852..84928459)
Genome browser
AA seq
1009 aa
AA seq
DB search
MTSNSQSSGTQPLWPPIVGSAGPPQNFGPPMSMQFRPVGSQQQGQPFIPPGSEQFRPVGQ
GMPVPNVGPSPQNQQLPFPPSMHQLHQRPGQPGHGPQPSQAIQMPFMQQNRPITSESPQP
HQNNQHMPGVGGSGMPPSSYTFAPSPYGQSQNNINASSHYQPISQMHTGVAPASGQTWLP
SGPVATAMQGQQSSATPAAVPATNLQPNPSIQLSSDWQEHTSTDGRRYYYNKKTKQSSWE
KPVELMTPIERADASTDWKEFTNSDGRKYYYNKVTKLSKWTIPEELKLAREQAEREASQG
AQSESASLSQPQESLTIPLPEASIPSSVPSGTTTSPVSVAPIVAVANQPTIAASGSPSLP
VLSANAAGVQSPVAAVTTLSNSTSRDGGVPVATTPATSTSDIANSLDGGASVQDLEEARK
GMAVAGKINVTLSKEKAVEEETLVYANKQEAKIAFKALLESANVESDWNWEQAMRVIIND
KRYGALKTLGERKQAFNEYLGQRKKQEAEERRVRQKKAREEFAKMLEESKELTSSTRWPK
AMIMFEDDERYKAVDRARDREDIFENFTLDLQKKEKAKAQEEHKKNITEYKQFLESCDFI
KPSSQWRKVQDRLEDDERCSRLEKIDRLDIFQEYIRELEKEEEEQRRIQKEQLRRAERKN
RDEFRKLMEEHVAAGDLTAKTHWRTYCMKVKDLPAYMAVSSNTSGSTPKDLFEDVAEELE
KQYRDDKTRVKDALKLGKITMSSALTYEEFKAAIAEDLNSVSDINLQLVFEELQERIKEK
EEKEAKKRQRLADDFSDLLHSIKDITTSSNWEDCKPLFEDSQEYRSIAEESDKKELFEDY
IRLLQEKAKEKERKRDEEKAKKEKERDDKEKRKEKDRKEKERERDRDKERERSKKDDTES
DTVDASDVKEERKRDKDKDRKHRKRHQSGADDMSSEKEEKDDSKKSRRHSSSRKKSRKHA
YTPDSDSEGGHKRHRKDHRDGSRRNGTNEELEDGELGEDGEIRANKAQP
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtaattcacaatcgtctgggacccagccgctttggcctccgattgttggatca
gctggtcctcctcagaactttggcccacccatgtctatgcagtttcggcccgttggttct
caacaacaaggacagccttttattcctccagggtctgaacagtttcggcctgttggtcag
ggaatgcctgtaccaaatgttggaccgtctcctcagaatcagcagctcccttttcctcca
tcaatgcatcagttacatcaaagacctggtcagccaggtcatggtccacagccatcacaa
gcaattcagatgccattcatgcagcaaaaccggcctattacatcagagtcgcctcagcct
caccaaaacaaccagcatatgccaggtgtaggtggcagtgggatgcctccttcctcatat
actttcgcaccatctccctatggccagtctcaaaataacattaacgcatcatcacattac
cagccaatctctcaaatgcatacaggggttgcacctgctagtggacaaacttggttgcca
tctggacctgttgccacagcaatgcagggccagcaatcatctgctacacctgctgcagtt
ccagcaacaaatcttcaaccaaatccctccattcagttatcatcagattggcaagaacac
acgtctactgatggcagaaggtattattataacaagaagacaaagcagtctagttgggaa
aagcctgttgaactaatgacaccaattgagagagctgatgcatccactgattggaaggag
ttcactaattcagatggaaggaagtattattacaataaggttaccaagctatctaaatgg
acaatacctgaagaattgaagttggctcgcgagcaagcagagagagaagccagtcaaggg
gctcagtcagaaagtgcttcgctttctcaaccccaagagtctctcactattccgttgccc
gaagcatctataccatcatctgtaccatctgggacaacaacaagccctgtttctgttgca
ccaattgttgccgttgcaaatcaacccactattgcagcttctggatcaccatcccttcct
gttctgtcagcaaatgctgctggagttcaatctccagttgcagctgtcactaccttatct
aattctacttccagagatggtggagttccagttgccactacaccagctacgagtacttca
gatattgcaaattctttagatggtggagcttctgtccaagatttagaggaagcaagaaaa
ggaatggcagttgctgggaaaattaatgttaccctatccaaggagaaggcagttgaagaa
gaaaccttggtttatgcaaataaacaggaagctaaaattgcatttaaagcgctcttggaa
tctgcaaatgtggaatctgactggaactgggagcaggctatgagagtaataataaatgac
aaaagatatggcgccttaaaaacacttggggagcggaagcaagcgtttaatgagtacttg
ggtcagaggaaaaagcaagaggctgaggaaaggcgtgttagacaaaaaaaggctcgggag
gaatttgccaaaatgttggaagaatcaaaagagcttacatcatccacaagatggcccaaa
gctatgataatgtttgaggatgatgagcggtataaagctgttgaccgagccagagaccgt
gaagatatttttgaaaattttacgctggacctacagaagaaggaaaaggcaaaagcacag
gaggagcacaagaagaatataacggagtacaaacaattcctggaatcttgtgattttatt
aaacccagcagccaatggcggaaagttcaggatcgcctagaggatgatgaaaggtgctca
cggcttgaaaaaattgaccgcttagacatctttcaggaatatatacgggaattagagaaa
gaggaggaagagcagaggaggattcagaaggagcaattgagacgtgctgagcgtaaaaac
cgcgatgagttccgcaagttgatggaggagcatgttgctgctggcgatctcacagctaaa
actcactggcgcacctattgcatgaaggtaaaggatttaccagcttatatggctgtatca
tcgaacacgtctggttcaacaccaaaggatttgtttgaagatgttgccgaagagctggag
aaacagtaccgagatgataaaactcgggtgaaagatgctctgaagttgggaaagattact
atgtcgtctgctttgacttatgaagagttcaaggctgctattgcggaggatctgaactct
gtatcagatattaacttgcagcttgtatttgaagagctgcaggaaaggatcaaggagaag
gaagagaaggaggctaaaaagcgtcaacgtctggctgatgacttctctgatctattacac
tcaattaaggatataacaacatcttcaaattgggaggattgcaagccactatttgaagac
agccaagagtatagatccattgcagaagagagcgataagaaggagctatttgaggactac
attagacttttgcaagaaaaggctaaagagaaggaacggaaacgcgacgaagagaaggca
aagaaagaaaaagaaagagatgataaagagaaaaggaaagagaaagacagaaaggagaag
gagagagaacgcgatagggataaggagagggaacgctctaagaaggatgatacagagagc
gacactgttgatgcatctgatgtgaaggaggagagaaaaagggacaaggataaggatagg
aaacaccgaaagcgacatcaaagtggggcagatgacatgagttctgagaaggaggagaaa
gatgattcaaagaaatcacgaagacatagtagttctaggaaaaaatcaagaaagcatgca
tacacgcctgattcggatagtgaaggtgggcacaagagacatcggaaagatcatagagat
ggctcccgcagaaatggcactaatgaggagcttgaagatggggaacttggagaggatggg
gagatacgtgccaacaaagcccaaccctga
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