Papaver somniferum (opium poppy): 113356838
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Entry
113356838 CDS
T05758
Name
(RefSeq) small RNA degrading nuclease 1-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113356838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psom03009
]
113356838
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
Pre-60S particles
RNases
113356838
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
113356838
NCBI-ProteinID:
XP_026455852
LinkDB
All DBs
Position
3:93249727..93254386
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AA seq
541 aa
AA seq
DB search
MVKIRKILALAEKEVLIDIVKNVQKRKMKGAKGEWKEFLVEYDSQLGDSLLDPSKRPPAC
LVAFLNTFTKEQDLEFCEKIMTYHSNRKAIEQLNKSCIDVQSSPQKLASLTFEHPEYPKC
FSFPSYDEDWVMMKIGKVSKAIKSTRMLSVDCEMVLCEDKTESLVQVCIVNRNLEVKLNE
LVKLDKPVIDYRTQIHGISAKDLERATCSLEDIQKSMKKLLSDGVVLIGHSLDKDLKALK
VDHSRVIDTSLIFKYPEGHTHMRPSLNHLRKTVLGYDLRESDAPHNCLADAQAAMKLVLA
KLENKFDGVIPLKIKESDGVVPLKSKEVFKIELVKLLFHAVPIAVPQKQLRRLFPKDSTV
KLQVSLTGENVYNSSAVFKESMEACNGFESIKGEEGKDSSGVPQKVISLDIKYKKDAGSV
SFYVRKVLKKVSSDKNPADKRSIQVEETKEQNKKPTKNSDQYDHVKEIQRLKKDLSDRSP
ADKRSIQVEETEDQNKKQKKHSDQCDHDKEIRRLKKEIKERDSELIHAQNILADLIKIRE
L
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagattcggaagattttagcattagcagagaaggaggtgcttattgacattgtg
aaaaatgtacaaaagagaaaaatgaagggtgcgaaaggagaatggaaggaatttttagta
gagtatgattcacaattaggcgacagtttattggatcctagtaagaggccacctgcttgc
ttggttgcatttttgaatacgtttacgaaagagcaagatttagagttttgtgaaaaaata
atgacgtaccactctaatcgtaaagcaattgagcaactgaataagagctgtattgatgtt
caatcctctcctcagaagctggcaagcttaacatttgaacaccccgaatatccaaagtgc
ttttcattcccatcttatgatgaggactgggtaatgatgaagatcggtaaagtatctaaa
gcaatcaagtccaccagaatgctatctgttgattgtgaaatggttctttgtgaagataaa
acagaatctctagtacaagtgtgtattgtgaatcgaaatttagaggttaagctcaatgaa
cttgtaaaactcgataaacctgttatagattatagaactcagattcatggaatcagtgct
aaggatttggaaagagctacttgttcgttagaagatatacagaaatcaatgaaaaagctg
ttatctgatggagtagttttaattggccacagtttggataaggatctaaaagcattgaaa
gtggatcattcgagggtgatcgacacatcattaatttttaaatatcctgaagggcatact
cacatgaggccttcgttgaatcatctccgcaagactgtgcttggttatgatcttagggaa
agtgatgctcctcataattgtctagccgatgcacaggctgcaatgaaattagttcttgcc
aagctggaaaataaatttgatggagtcattcccttgaaaatcaaagagagtgatggagtc
gttcccttgaaaagcaaagaggtgttcaagattgaattggtaaagcttttgtttcatgcg
gtacctatagcggttccccagaaacaattaagacgactatttccgaaggactctactgtc
aaacttcaggtgagcttgaccggtgaaaatgtttataattcttctgctgttttcaaagag
tcaatggaggcatgtaatggatttgaaagtatcaaaggagaagaaggaaaggactcatct
ggagttcctcaaaaagtaatctcccttgacatcaagtataaaaaagatgccggttctgtc
agtttctatgttcgtaaagttttaaaaaaagtttcatctgacaaaaatcctgcagacaaa
agatctattcaagttgaggaaaccaaggaacagaacaagaaaccaacaaaaaactcagat
caatatgatcacgtcaaagagattcaaagattaaaaaaggatttatctgacagaagtcct
gccgacaaaagatctattcaagttgaggaaactgaggatcagaacaagaaacaaaagaaa
cactcagatcaatgtgatcatgacaaagagatacgaagattgaaaaaagaaatcaaggaa
agggattctgaactcattcatgctcaaaatatccttgctgatcttataaagatacgtgaa
ctctga
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