Papaver somniferum (opium poppy): 113356962
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Entry
113356962 CDS
T05758
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00900
Terpenoid backbone biosynthesis
psom01100
Metabolic pathways
psom01110
Biosynthesis of secondary metabolites
Module
psom_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
113356962
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
psom01006
]
113356962
Enzymes [BR:
psom01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
113356962
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
113356962
2.5.1.29 geranylgeranyl diphosphate synthase
113356962
Prenyltransferases [BR:
psom01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
113356962
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
113356962
NCBI-ProteinID:
XP_026455986
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All DBs
Position
3:complement(99821851..99823199)
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AA seq
355 aa
AA seq
DB search
MISFTTVIPSSSSTSDLYLTRNRPIFRYHQRAFPCSASVSASPSSDQIQFDLKTYWKTLI
TEINQKLDEAIPVKYPEQIYESMRYSVLDKAAKRAPPIMFIASAELFGVPRRAAFPTACA
LEMVHAASLIHDDLPYMDDDLTRRGRPTNHAIYGEDMAILAGDALFPLGFQHIVTYTPTD
IIPESRILRVISEFARAVGSTGMAAGQFLDLTNGNKNLEFVQEKKFGEMAECSAACGGLL
AGADDEEVARLRRYGRTVGVLYQMVDDVLKAKEMKGEGTKNREKMSYVSVNGVDKALEMI
EELKTKAKKELDGFDKYGYEKVAPLYSFVDYAVHRGFVVVDNQDDVSDAREAASL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatttccttcacaactgtcattccctcttcttcttctacttccgatctctacttaacc
agaaatcgcccgattttccgataccatcaacgagcattcccatgttcagcttcagtttca
gcttcaccatcatccgatcaaatccaatttgatctaaagacatattggaaaaccttaatt
acagaaatcaatcagaaattagatgaagccattcctgttaagtatcctgagcagatctac
gagtcaatgcgctattccgttcttgacaaagctgctaaacgggctccccctattatgttc
atcgcctccgctgaactcttcggagttcctcgccgcgctgctttccctactgcttgtgcc
ctagaaatggttcatgcagcttcactgatacacgatgatttaccatatatggatgatgat
ttgacaagaagaggtagaccaacaaatcatgcaatttatggtgaagacatggcaattcta
gctggagacgctctatttccgttagggtttcaacatatagtaacatacaccccaactgat
atcattcctgaatctcgaatactacgtgtgatctcagaatttgcacgggcagttggttca
acaggtatggcagcaggacaatttcttgatttaacaaatggtaataaaaatcttgaattt
gtgcaagaaaagaagttcggagaaatggccgagtgttctgcagcttgcggtggattatta
gccggagctgatgacgaagaggtggcgagattgagaaggtatggaagaactgttggagtt
ttgtatcaaatggttgatgatgttttaaaagcaaaagaaatgaaaggagaagggacgaag
aatagggagaaaatgagttatgtgagtgttaatggtgtagataaagctttagaaatgatc
gaggaattaaaaacaaaggctaagaaagaacttgatggatttgataagtatggttatgaa
aaagttgcacccctttacagttttgttgattatgctgttcatagaggatttgttgttgtt
gataatcaagatgatgttagtgatgctagagaggctgcttctctgtag
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