Papaver somniferum (opium poppy): 113357194
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Entry
113357194 CDS
T05758
Name
(RefSeq) WD-40 repeat-containing protein MSI3-like
KO
K10752
histone-binding protein RBBP4
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03082
ATP-dependent chromatin remodeling
psom03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113357194
03083 Polycomb repressive complex
113357194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psom03036
]
113357194
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
113357194
Histone modification proteins
HAT complexes
HATB complex
113357194
HDAC complexes
Sin3A-HDAC complex
113357194
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
113357194
PRC2.2
113357194
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
113357194
Heterochromatin formation proteins
Other heterochromatin formation proteins
113357194
Chromatin remodeling factors
NuRD complex
113357194
NuRF complex
113357194
NuRF complex (fruit fly)
113357194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
EIF3I
WD_LRWD1
Beta-prop_EML
Beta-prop_HPS5
WD40_RFWD3
ANAPC4_WD40
MIOS_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
RMC1_N
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
113357194
NCBI-ProteinID:
XP_026456308
LinkDB
All DBs
Position
3:complement(121190340..121193568)
Genome browser
AA seq
400 aa
AA seq
DB search
MGGEEDEQMVTEEFTVWKKNTPFLYDLVISHALEWPSLTVQWLPTPPSPPQQQDDDNISF
AVHKLILGTHTSDGVPNYLMIAEALLPISSDSYDTNTSSDNISIPRVQVTKQILVDGEVN
RARCMPQNADLIAAKTSGAEVYVFNSSKKQDEKPSSCEPDFRLRGHVKEGYGLSWSPFKE
GYLLSGSNDSKICLWDISATASADKVLDAMNIYQVHDDIVEDVAWHLKNENLFGSVGDDH
RLMIWDLRSSTSGKPQESVVAHAKEVNSLSFNPFNEWILATASSDMTVNLFDLRKLTSPL
HSFSGHTEEVFQVEWSPKHETVLATSAADRRLMIWDLSRIGDEQSEEDAEDGPPELLFSH
GGHTAKISDFSWNQNEPWVISSVAEDNILQVWQMAESIYQ
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcgaggaagatgagcagatggtgaccgaagaatttacagtatggaaaaagaac
acaccattcttgtacgatctagttatttctcatgccctagaatggccttctcttactgtt
caatggctccctactcccccttcacccccacaacaacaagatgatgataatatctcattt
gctgtacacaagctcatcctcggtactcatacatccgatggggttcctaactatctcatg
atcgcagaagctcttcttcccatctccagcgactcctacgacaccaatacttcttcagat
aacatcagtattcctagggttcaggtaacaaaacagattcttgttgatggagaagtcaat
cgagctcgttgtatgccacaaaatgctgatttaattgctgccaagacaagcggagcggag
gtttatgtatttaattccagcaagaaacaagatgagaagccttcctcctgtgaaccagat
tttcgattgaggggtcatgtcaaagaaggatatggactttcttggagtccttttaaggaa
ggttaccttcttagtgggtctaatgattcaaaaatatgtttatgggatatcagtgcgacg
gcttccgctgataaagtacttgatgctatgaatatttaccaggttcatgacgacattgtt
gaagatgtagcatggcatctgaagaatgaaaatttatttggatcagttggggatgaccat
agattgatgatttgggatttgcggtcctcaacgtccggtaaaccacaagagtctgttgta
gcacatgccaaagaggtgaattcgttatcattcaatccattcaatgagtggatattggct
actgcatcttcagatatgactgttaatctattcgacttgcggaagctaacgtcaccgttg
catagtttctctggccacactgaggaggtattccaggtcgaatggagccctaagcatgaa
acagtcttggcgacttctgctgctgacaggagattgatgatttgggaccttagcaggatc
ggtgatgagcaatcagaggaagatgcagaggatgggccacctgagcttcttttctctcat
ggaggtcacacggccaagatctcagacttctcgtggaatcaaaatgagccgtgggttatt
tcgagcgtggcagaggacaacatacttcaggtctggcagatggcagagagcatttatcag
taa
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