Papaver somniferum (opium poppy): 113357202
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Entry
113357202 CDS
T05758
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113357202
Spliceosome [BR:
psom03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113357202
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_10
RRM_occluded
RRM_ACIN1
RRM_PARP14_3
DUF6574
RL
GlcNAc-1_reg
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
113357202
NCBI-ProteinID:
XP_026456317
LinkDB
All DBs
Position
3:121588194..121593213
Genome browser
AA seq
469 aa
AA seq
DB search
MTTEAPSKVIHVRNVGHEISENDLLQLVQPFGTVTKLVMLRAKNQALLQMHDLPSAINAL
QYYTNVQPSVRGRNVYIQFSSHQELTTMEQNAQGRKADQDAEPNRILLVTIHHLLYPITV
EVLHQVFSPHGYVEKIVTFQKSAGQLLQVFSFHLSLSLFHAFKVMLGFQALIQFQSRQNA
VMARDGLQGRNIYDGCCQLDIQFSNLTELQVNYNNERSRDFTNPSLPSEQKGRSSQPGYS
DAGGLYSLQPSGAYPQMGNAAAIAAAFGGGLPPGISGTNERCTVLVSNLNSDKIDEDKLF
NLFSIYGNIIRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRMEVNFSKFPTIT
TAPDTHEYSNSNLNRFNRNASKKYRYCCSPTKMIHLSTLPQEITEEEIVAHFEEHGAIVN
TKLFEANGKKQALVLFETEEQATEALVCKHAITIEGSVIRISFSQLQSI
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaccactgaggctccttcaaaagtcattcatgtacgaaatgtgggacatgaaatttca
gagaatgatctacttcagctcgttcagccttttggtactgtcaccaagctcgtcatgtta
cgtgctaaaaatcaggctcttctccagatgcatgatcttccatctgccatcaatgcattg
caatactacactaatgttcagccaagcgttaggggtaggaatgtttacattcaattctct
tcgcatcaagagcttacgacaatggaacaaaatgctcaaggacgaaaagctgaccaggat
gcagagcccaatcgaatactcttagttacaattcaccacctgctctatcctattacggtg
gaagtgcttcaccaagtgttttctcctcatgggtatgtggagaagatcgtcacatttcag
aagtcggctggtcagctactacaagtcttctctttccatctctctctctctctctttcac
gcttttaaggttatgctgggttttcaagctctaatccagttccaatcacgccagaatgct
gttatggccagagatggtctccaagggcgtaatatatacgatggttgctgtcagctggat
attcagttctcaaacctcactgaattacaagtgaactataacaatgagcgttcaagggat
ttcacgaacccgtctttaccatctgagcagaaaggcagatcctcacaacctggttacagc
gatgctgggggactatattcactgcaaccttctggagcttatccacagatgggaaatgct
gcagctattgcagctgcatttggaggaggattgcctcctgggataagtggtactaatgaa
aggtgcaccgtcctggtttcgaatctgaactctgataaaattgacgaggataagcttttc
aacctgttctcgatttacgggaacatcataagaatcaaacttcttcgcaacaagccagat
catgcacttgttcagatgggagatggtttccaggcggagttggctgtgcactttttgaag
ggcgccatgctttttggtaagagaatggaggtgaacttctcaaaatttccaaccatcaca
acagcaccagatacacatgaatactcaaattcgaatctgaaccggttcaatcgaaatgcc
tcgaaaaagtatcgatactgctgctccccaactaagatgattcacctttctactcttcct
caagagatcacagaggaggagattgtggcccacttcgaagagcatggcgcaatagtcaat
accaaactttttgaggcaaacgggaagaagcaggctctggtgctgttcgaaaccgaggag
caggcaactgaagctcttgtttgcaagcatgcaatcaccatcgaaggctctgtaatccgc
atctctttctcccagttgcagtccatctaa
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