KEGG   Papaver somniferum (opium poppy): 113357250
Entry
113357250         CDS       T05758                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03020  RNA polymerase
psom03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    113357250
  09124 Replication and repair
   03420 Nucleotide excision repair
    113357250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psom03021]
    113357250
   03400 DNA repair and recombination proteins [BR:psom03400]
    113357250
Transcription machinery [BR:psom03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     113357250
DNA repair and recombination proteins [BR:psom03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      113357250
SSDB
Motif
Pfam: RNA_pol_Rpb4 TRF
Other DBs
NCBI-GeneID: 113357250
NCBI-ProteinID: XP_026456389
LinkDB
Position
3:123452694..123455568
AA seq 138 aa
MSEQEEENAAELKIGEEFLKAKCLMNCEVALILDRKFDQLQAMSSDPMSQVSQVFEKSQQ
YVKRFSRYKNADAVRQVREILSRYQLAEFELCVLGNLCPETADEAKAMVPSITTKERGCT
DENIEKMLNDLSLIKKFE
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtcagaacaagaagaagaaaatgccgctgagctaaaaatcggagaagaatttttgaag
gccaagtgtttgatgaattgtgaagttgctctcattcttgatcgtaaatttgatcagctt
caagcaatgtctagtgatccaatgagtcaggtttctcaagtgtttgagaagtcgcagcag
tatgtcaagcgctttagccgttacaaaaatgctgatgctgttagacaagttcgagaaatc
ctaagtagataccagttggctgagtttgagctttgtgtacttggaaacttgtgccctgaa
actgcagatgaagctaaagccatggttccgtctattacgaccaaggaaagaggttgcact
gacgaaaatatcgagaagatgttgaacgacctttcattgatcaaaaagtttgaatga

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