Papaver somniferum (opium poppy): 113357306
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Entry
113357306 CDS
T05758
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113357306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113357306
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113357306
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
113357306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
113357306
NCBI-ProteinID:
XP_026456458
LinkDB
All DBs
Position
3:126320398..126324699
Genome browser
AA seq
331 aa
AA seq
DB search
MRDMKELQVSLNQTQKVRLQTAIQQLEKLTARLSNSADASVTVAETIPGNHEEGVLKGHG
TSEVDGEIVATLCGIVEKVNKLVYVRTLRARYKPETGDIIVGRVIEVAPKRWRLEINFSQ
DAVLMLSSMNLPDGIQRRRTATDELNMRSIFEENDVICAEVRGFQHDGTLHLQARSQKYG
KLEKGQLLSVSSYLVKRRKQHFHHLQDYGIDLILGCNGFIWVGEHVEVRDDMITDDQENK
PELSKPNFKSMSLEEQEQTYTPLETRENICRIANAIRVLTSLGITLTVDVIVATVEMSKA
LYFDTHEMVGAEFYVQVAEKEVERRSSAKKK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgagagacatgaaagagttacaagtatcgttaaatcaaacacagaaagtcagattacaa
acagctattcaacagcttgagaaattaacagcaagacttagtaattcagctgatgcttct
gtaactgttgctgaaactatccctggtaaccatgaagaaggtgttctcaagggtcatgga
acatctgaggttgatggagaaatagtagcaactctatgtggaattgtagagaaagttaac
aagcttgtttatgttcgtactttaagagctagatacaagccagagactggagatataatt
gttggtcgcgtcattgaggttgctccgaagcgttggagactagaaattaattttagtcaa
gatgcagtcttaatgctttcatcgatgaatttgcctgatggtatccagagaaggagaaca
gctactgatgaactcaatatgcgttccatttttgaggaaaatgatgtcatctgtgctgaa
gttcgtggtttccagcatgatgggactttgcaccttcaagcaaggagtcagaagtatgga
aagcttgagaaaggtcaattgcttagtgtgtcctcttatctggtgaagagacgaaaacag
catttccaccaccttcaagactatggcatcgacttgattctaggatgcaatggattcatc
tgggttggtgaacatgttgaagtaagagacgacatgataactgatgatcaagagaataaa
ccagagttgagcaaaccaaatttcaaatcaatgagtcttgaagaacaagaacaaacttac
actcctctagagacaagggagaacatttgtcggattgctaatgcaattcgggttttaact
agtctgggaatcactctcactgtcgacgttatcgttgcgacagtagaaatgagtaaagca
ctgtattttgatacccatgaaatggttggagcagagttttatgtccaagttgcagagaag
gaggtcgaaagaagatcatcggcaaaaaaaaagtga
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