Papaver somniferum (opium poppy): 113357440
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Entry
113357440 CDS
T05758
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
113357440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113357440
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
113357440
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_6
F-box-like
LRR_14
F-box
LRR_At1g61320_AtMIF1
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
113357440
NCBI-ProteinID:
XP_026456615
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Position
3:134629949..134633376
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AA seq
583 aa
AA seq
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MANSFPEEVLEHVFSFVKTDRDRNTISLVCKSWYALERWCRRRIFIGNCYAVSPRILIRR
FPEVRSVSLKGKPHFADFNLVPEGWGGYAYPWILAMSEAYPWLEELRLKRMVVTDESLEL
ISKSFKNFRVLVLSSCEGFTTDGLAAIAANCRNLRELDLRECEVDDRRGNWLCHFPESCT
SLVSLNFACLDGEVSFSALERLVSRCTNLRTLRLNHAVPLDKLPSLLARAPQLVDVGTGV
FSADFRPEVYSKLAGAFGSCRGLKSLSGLWEVAPAYVPAIYSICTGLTSLNLSYASIQSP
ELIKLVSQCRNLQRLWVLDYIEDRGLEAISESCKDLQELRVFPSEPYDVDQNVSLTEQGL
VSVSEGCPKLESVLYFCRQMSNAALITVARNRPNMTRFRLCIIEPRTPDYLTFQPLDDGF
GAVVEHCKDLRRLSLSGLLTDRVFEYIGAHAKRLEMLSVAFAGDSDLGLHHVLSGCKSLR
KLEIRDCPFGDKALLANAGKLETMRSLWMSSCSVSFGACKLLGQKMRRLNVEVIDERGTP
DSRPDDYPVERLYAYRTVAGPRFDSPDFVWMIDDDSSAFRQLA
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcgaattcatttccagaagaagtattagaacatgtattttcattcgtgaaaacagat
agagataggaatacaatatcattagtttgtaaatcttggtatgcattagaaagatggtgc
agaagaaggatctttattggtaattgttatgcagttagtccaaggatattgataagaagg
tttccagaagttagatctgtatcattgaaaggaaaacctcattttgctgattttaattta
gtacctgaaggttggggtggttatgcgtatccatggatcttagctatgtctgaagcttat
ccttggttagaagagttgagattgaaaagaatggttgtaactgatgaaagcttagagttg
atttctaagtcttttaagaattttagggttttggttctttcttcttgtgagggtttcact
actgatggattagctgccattgctgcaaattgcaggaatctgagagagctggacttgaga
gaatgtgaagttgatgatcgtcgtggtaactggctttgtcattttcctgagtcgtgtact
tcattagtctccctcaattttgcatgccttgatggggaggtcagcttctctgctctagaa
cgcttggttagtagatgtaccaatttgaggactctccggctgaaccacgcagtgcctctt
gataagcttccaagccttcttgctcgggctccacaacttgtggatgttggtacgggtgtt
ttttcagcagattttcgcccagaagtctattcgaagcttgctggtgcctttggaagctgc
agggggctgaagagtttgtctgggttatgggaggtggcccctgcatatgtcccagccatc
tattcaatttgcaccggacttacatctttgaacttgagctatgccagtatccaaagtccc
gagctcatcaagctggttagccaatgtcggaatctgcagcggttatgggtattggattac
atagaagatagaggtcttgaagccatttctgaatcctgcaaggacttgcaagaactgagg
gtgttcccgtccgagccatatgacgtggaccagaatgtctcactgacagagcaaggtctt
gtttctgtttccgagggctgccccaagcttgaatcagtgctttacttttgtcgccagatg
tccaatgcggcactaataaccgttgccaggaacaggcccaacatgacgcgtttccgtctt
tgcatcatagagccccgaacacccgattacttaacctttcaaccacttgatgatggtttt
ggggctgtcgtggaacactgcaaggatcttcggcggctttctctttctggtcttttgaca
gaccgtgtcttcgaatacattggagcacatgccaaaaggcttgaaatgctatcagtggct
tttgcaggtgatagtgatctgggcctccatcatgtgctgtcagggtgcaaaagcctccga
aagttggagattcgagattgcccctttggtgacaaggctctcctggccaatgcagggaag
ctggaaacaatgcgatccctttggatgtcttcttgctcagtgagttttggagcatgtaaa
cttcttggtcagaagatgcggaggcttaatgtcgaagttattgatgagagaggaacaccg
gattcaagaccagatgactaccctgttgagaggttgtacgcttataggacagtagcaggt
cctcggttcgattccccggacttcgtttggatgatagatgatgattcctcggcttttcgg
cagctggcttaa
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