KEGG   Papaver somniferum (opium poppy): 113357452
Entry
113357452         CDS       T05758                                 
Name
(RefSeq) WD repeat-containing protein 48-like
  KO
K15361  WD repeat-containing protein 48
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    113357452
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psom03400]
    113357452
DNA repair and recombination proteins [BR:psom03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     113357452
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_Prp19 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_EML EIF3I Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR41 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_SPT8 NBCH_WD40 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_DCAF12 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_ACSF4 Beta-prop_Vps41 RAWUL ANAPC4_WD40 Beta-prop_Aladin PAN2_N
Other DBs
NCBI-GeneID: 113357452
NCBI-ProteinID: XP_026456626
LinkDB
Position
3:135938204..135946228
AA seq 762 aa
MHRVASAGGVSGSSRPRKEKKLTYVLNDADDSKHCAGVNCVAVLKSAVLDSCDYLFTGSR
DGTLKRWALGEDDATCSATFESHVDWVNDAVLAGNNTLISCSSDTTLKAWNCLSDGTCTR
TLRQHSDYVTCLAAAEKNSNVIASGGLGGEVFVWDLEAALYPVSKPTEAVEDENSNGIVG
SGNSGVPMTSLRSIGSSSSISMHPSQSHGYSPIAAKGHKESVYALAMNDSGTLLVSGGTE
KVVRVWDPRTGTKTLKLRGHTDNIRALLLDSTGRFCLSGSSDSMIRLWDLGQQRCVHSYA
VHTDSVWALASTPTFSHVYSGGRDLSVYLTDLGTRESVLLCTKEHPISQLALHDDSIWVA
TTDSSVHKWPAEGRTPQKVFERGGSFLAGNLSFTRARASLEGSTPVPVYKEPSFAIPGTP
GVVQHEILNNRRQVLTKDTAGSVKLWEITRGVVVEDYGQVSFDEKKEELFERVSIPAWFT
TDSRLGSLSIHLETPQCFSAEMYSVDLNTVGVPEDHKINLAEETLKGLFAHWLTKRKQKS
GPQASVNGEIPLGKDLPVRSHSHSRVELEVKPDSHSSAVHPAFEFSTVSPPSIITEGSHG
GPWRKKITNLDGTEDDKEIPWWCLDCILNKKIPHKDNTKCSFYLHPCEGSTVQVLTQGKL
SAPRILRIHKVINYVVEKMVLDKPLDGVTSDAPFAAGASLSTIVGDSSFRTGLKPLQKLK
PNIEILCNNQVLTPEMSLATVRAYIWKKADDLILNYRVVQSR
NT seq 2289 nt   +upstreamnt  +downstreamnt
atgcaccgtgtagccagtgctgggggcgtatctggttcatcccgtcctcgaaaggagaag
aagttaacatatgtgctcaatgacgctgatgactcaaagcattgtgcaggtgtaaattgt
gtggctgttttaaaatcggcagtactggatagctgcgactacttatttaccggaagcaga
gatgggactctaaagaggtgggcattaggcgaggacgatgctacctgctctgccacattc
gagtcgcatgttgattgggtaaatgatgcggttcttgcaggcaacaacacactaatttca
tgctcgtcagacaccacactcaaggcatggaattgcttatccgacgggacttgcacaaga
actctccgtcagcactcggattatgttacatgtcttgctgcagctgaaaaaaatagcaat
gttattgcctctggtggacttggtggagaagtatttgtttgggatctcgaagctgctctt
tatccagtatcaaagccaacggaagcagtggaagacgaaaattcaaatggcatagttggc
tctggaaactccggcgtgcctatgacaagtttacggtcgattggttcaagcagcagcatt
tccatgcacccaagccagtctcatggatatagtcctattgctgcaaaagggcacaaagag
tctgtctatgcattggcaatgaatgatagcgggactttgctagtttctggtggaactgag
aaggtggtacgtgtttgggatccaagaactggtacaaagactctgaagctaagagggcat
actgataacattagggcacttcttctggactctactgggaggttttgcttatcaggatcc
tcagattcaatgattagactatgggatcttggtcaacaacgttgtgtgcattcctatgct
gtgcatacagactcagtttgggcactcgccagcactccaacattcagccatgtctatagt
ggtgggagggacctctctgtgtacctaacagacttgggcaccagagagagtgttttgctt
tgtacgaaggagcatcctatctcacagcttgcgctgcatgatgatagcatatgggttgca
acaacagattcttctgtacacaagtggccagctgaaggtagaacccctcaaaaagttttt
gaaagaggtggttcattcttggctgggaacttgtcctttaccagagcaagggcaagctta
gaaggatcaactcctgttcctgtttataaagaaccctcttttgctattcctggaactcca
ggcgtagtgcagcatgaaattttgaacaacagaaggcaggttctaacaaaggataccgct
ggatcagtgaagttatgggagattacaaggggcgttgtggttgaggattatggccaggtt
tcatttgacgagaaaaaggaggaactttttgagagggttagcattcctgcatggttcacc
acagattcgaggcttggaagtttgtctatccatttggagaccccacaatgtttttctgca
gagatgtattctgttgatctaaacacagttggggttcctgaggatcacaagattaatcta
gctgaggagaccttaaagggattgtttgctcactggttaacaaaaagaaagcagaagtct
ggtccgcaagcttcggtaaatggcgaaattcctttggggaaggatttacctgtcagaagc
cattctcactcaagagtcgagcttgaagttaaacctgatagtcacagctctgctgttcat
cctgcatttgagttttcaacagtttcaccaccatctatcatcaccgaaggttctcatgga
ggtccatggagaaagaaaattactaacctggatggcacagaagatgacaaggaaattccg
tggtggtgtttagactgcattttgaataaaaagatccctcacaaggataataccaagtgc
agcttttatttgcatccatgtgaaggttcaacagtccaagtgctcacacaagggaagttg
agtgcaccgagaatattgcgcattcacaaagtcattaattatgtcgtagaaaaaatggtt
cttgacaaaccactagatggtgtgacctctgatgcaccttttgccgccggagcttcactt
tcaacgattgtgggggatagcagcttccgaacaggcttgaagccactgcaaaaacttaag
cccaacatagagattttgtgtaataatcaggttttaactccagaaatgagtttagccaca
gttcgagcttatatatggaagaaagctgatgacttgatccttaactacagagtggtgcag
agtagatag

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