Papaver somniferum (opium poppy): 113357531
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Entry
113357531 CDS
T05758
Name
(RefSeq) RING-H2 finger protein ATL39-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113357531
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113357531
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
113357531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-RING_16
Prok-RING_1
zf-RING-like
DUF996
EphA2_TM
WLS-like_TM
RINGv
zf-C3H2C3
zf-Nse
Prok-RING_4
Sec61_beta
DUF2970
Motif
Other DBs
NCBI-GeneID:
113357531
NCBI-ProteinID:
XP_026456745
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All DBs
Position
1:complement(198891423..198892013)
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AA seq
196 aa
AA seq
DB search
MAETIHFILLLVLLLLPFTSAQSNTDYPYGDNAKISPRVVIIMAGLICAFLFMVVLAIYN
RRCFSDARSRGDSVQSTDDVTTTRKEGLDSTVIKTFPEFVYPNVKNFKMIDTEETAVLEC
VVCLSEFEDEDVLRQLPTCLHSFHKDCIDIWFVSQSTCPVCRYNLKQIAPGIALNADDDV
VIDVLEGDENRTEMAT
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaccatccacttcatactgctgttagtgcttctattactaccattcacatct
gcacagagcaatactgattacccgtatggagacaatgcgaaaatcagtccacgggttgta
attattatggcggggttaatctgcgcatttctgttcatggttgttctggctatttataac
cggcgatgtttttctgatgcacgaagtagaggtgatagtgttcagagtactgacgatgtt
acaacaacaagaaaagaaggacttgattcaactgttattaaaacgttcccggagtttgta
tacccaaatgttaagaatttcaagatgattgatactgaagaaactgcagtgctagaatgt
gtggtttgtttaagtgaatttgaggacgaagacgtgctgagacaattacctacatgtctc
cattcttttcataaagattgcattgatatttggtttgtttctcaatctacttgtccagtt
tgtcgctataatctcaaacaaattgctcccggaatcgcactcaatgccgacgatgatgta
gtaattgatgtattggaaggtgatgaaaaccgcaccgaaatggcaacatag
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