Papaver somniferum (opium poppy): 113357539
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Entry
113357539 CDS
T05758
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113357539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113357539
Spliceosome [BR:
psom03041
]
Common components
Common spliceosomal components
SR proteins
113357539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
113357539
NCBI-ProteinID:
XP_026456763
LinkDB
All DBs
Position
3:140714702..140722852
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AA seq
299 aa
AA seq
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MTGRSSRTLYVGNLPGDIREREVEDLFYKYGPIIDIDLKVPPRPPGYAFVEFEDARDAED
AIRGRDGYSFDGHRLRVELAHGGRGQSSSIDRHSSYSSGGGRGGVSRRSDYRVLVTGLPS
SASWQDLKDHMRRAGDVCFSQVYREGSGTIGVVDYTNYDDMKYAIRKLDDSEFRNAFSRA
YVRVKEYDSRRSLSRSRSRSSSLRSRSRSRSYSRSKSRSKSLRTKSSRYSVSRSRSRSVS
SDSRSASASRSPSRSRSPLPARRVRSSKKRTPSRSRSLSQSLSPAVRSDRSRSVDSRGR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgactggtcgttcaagtcgaactctgtatgttggtaatctcccaggagatatccgtgag
agggaagtggaggatttgttttacaagtatggtcccatcatcgatattgatctaaaggtt
ccaccaaggcccccaggttatgcctttgtcgagtttgaagacgctcgcgatgctgaggat
gctatccgtggtcgggatgggtatagcttcgatgggcatcgtctgcgggtggaacttgca
catggcgggcgagggcagtcgtcatcaatagatcgtcatagcagttacagtagcggtggt
ggtcgtggtggagtatccaggcgctcagactaccgtgtgttggtcactggattaccttct
tctgcttcatggcaagacctaaaggatcacatgcgccgagctggggatgtctgtttctcg
caagtgtatcgtgaaggcagtggtactatcggtgttgttgattacacaaattatgatgac
atgaaatatgcgatacgaaagcttgacgactccgagtttcgcaatgcattttctcgggct
tatgtgcgggtgaaggagtatgactcaaggcggagtttatcccggagcaggagtcggagt
tcatctttgagaagcagaagccgcagccgcagctacagtcggagcaagagccggagcaag
tctctaaggaccaaatcttctcgctattctgtgtctagatctcgatccagatctgtatct
tcagattctcgttcagcctctgcgtccagatccccatcaagatcaagatctccattacca
gctagacgcgtgagaagttcgaaaaaacgaactcccagccgaagcaggagcttatcccag
tctctttcacctgcggtgagatctgatcgcagccgttctgttgactccagaggccggtag
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