Papaver somniferum (opium poppy): 113357639
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Entry
113357639 CDS
T05758
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113357639
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psom01009
]
113357639
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113357639
03036 Chromosome and associated proteins [BR:
psom03036
]
113357639
Protein phosphatases and associated proteins [BR:
psom01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
113357639
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
113357639
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
113357639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ComGF
Motif
Other DBs
NCBI-GeneID:
113357639
NCBI-ProteinID:
XP_026456865
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All DBs
Position
3:complement(146793656..146798142)
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AA seq
499 aa
AA seq
DB search
MTPPVNGDLGFPSPLQWKFSQVFGERAAGEEVQEVDIISAIEFDKSGEHLATGDRGGRVV
LFEKTDGKDFTFRKELEKTDYSIPRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKVRWC
QTSNGALFLLSTNDKTVKYWKVQEKKIKKVAEVNLDTSGAKSNGGLPGKIGAGSDFVFPP
GGIPSLHLPVVIVGQETNLVPRCRRVFAHAHDYHINSIANNSDGETFISADDLRINLWNL
EISNQSFNIVDVKPVNMEDLTEVITSAEFHPTHCHTLAYSSSKGTIRLIDMRQSALCDSH
AKIFEENDTPGSRSFFTEIIASISDIKFGRDGRYILSRDYMTLKLWDLNMEASPVATFQV
HEHLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFRVFGSAPGSNEATTLEASK
NPIRRQPQTPTRSLRSLTSLSRSRRRGSENMGIDAGGNDFSTKLLHLAWHPTSNVLACAA
ANSLYMYYAEENPQSEHQK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgactccacctgttaatggagatttgggttttccatctccacttcagtggaaattctca
caggtttttggtgaaagagcagctggtgaagaagttcaagaagttgatattatttctgct
attgaattcgacaaaagcggtgagcatcttgcaactggtgatcgaggaggacgagtggtt
ttatttgagaaaacagatgggaaagattttaccttccgcaaggagctggagaaaacggat
tattccatccccaggcatccagaattccgttacaagactgagtttcagagtcatgagcct
gagtttgattacttgaaaagtttggaaatagaagagaaaattaataaagtacggtggtgt
caaacatccaatggtgctcttttccttctctcgacaaatgacaaaacagtaaaatattgg
aaggttcaagaaaagaagataaagaaggtagctgaggtgaacttagacacttcaggggca
aaatcaaatggaggacttcctggaaaaattggagctggatctgactttgtatttccacct
ggaggaattccctctttacatttaccagtggtaattgttggccaggaaacaaaccttgtt
cctagatgtcgaagagtatttgctcatgcacatgactaccacataaattccattgcaaac
aacagtgacggtgagacatttatctctgcagatgatttacggataaatttgtggaacctg
gagatcagtaatcaaagttttaatattgttgatgtgaagccagtaaacatggaggatctc
actgaggtcataacgtctgcagaatttcatcctacacattgtcatacattagcatacagt
agctcaaagggaacaatacgccttatcgatatgaggcagtcagctctatgtgattcacat
gccaaaatatttgaagagaacgatacacctggttcacgctcattcttcacagaaataatt
gcctcaatatcagatattaagtttggaagagatgggagatatatattgagtcgtgattat
atgacgctaaagctttgggatttaaatatggaagctagccctgttgcaacctttcaagtc
catgaacacctgagacccaagctttgtgatctttatgagaatgattcaatttttgacaaa
tttgagtgttgtttgagtggtgatggcctgcgcgttgccactggttcttacagcaatctc
ttccgtgtatttggttctgctccgggcagtaatgaggcaacaacattagaggccagcaag
aaccccataagacgtcaacctcagactcctactagatctttaaggtcactcaccagtcta
tcacgctcacgtagacgaggatctgagaatatgggcatagacgctggtggaaatgatttc
tccactaagctgctccatcttgcatggcatccaacctccaacgttctggcttgtgcagcc
gcaaatagtctttacatgtattatgctgaggaaaatccacaaagcgaacatcaaaagtag
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