Papaver somniferum (opium poppy): 113357794
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Entry
113357794 CDS
T05758
Name
(RefSeq) putative tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psom03016
]
113357794
Enzymes [BR:
psom01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
113357794
Transfer RNA biogenesis [BR:
psom03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
113357794
Prokaryotic type
113357794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
113357794
NCBI-ProteinID:
XP_026457036
LinkDB
All DBs
Position
3:complement(159578107..159580932)
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AA seq
512 aa
AA seq
DB search
MAISSCLRLPLSPSWIIRTPSYSSSFQFSIPNYNLNNNQRLYLIPRFYCSTSSSLDQLVD
IPPPPAITTTGLKWESFRKKKVVMRVGYVGTDYKGLQIQRQETSAMTIEGELEKAIFKAG
GIRESNYGDLQKIGWGRSSRTDKAVHSLATTISLKMEIPETAWVDDPWGIALANYVNSNL
PDNAKVFSILPSQRSFDARRECTIRKYTYLLPVEVIGIKSDCSSAEIDHHLSEFNSILNS
FEGEHPFHNYTIRSQYRTQPPGGKVAKTRRAITSNKASDCNSEKIDIVEKGVADGVITSS
KDSDEHLDDIVENSEEVLQVPGTVQPIRARWLHEPDESDKIGAAHFRKIHVCSCGEVEKM
QGKSYIEINIVGESFMLHQIRKMVGTAVAVKRKLLPRDIMVLSLNKFTRFILPIAPSEVL
ILRGNQFTVINRNGNATRPEMKTLVESEEILKGVDNFYKFQLLPQLTQFLEPSQAPWKQW
VEILDANTGMPDTEMEDVRNAWKAWKQSFRRF
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcaatctcttcttgtttgcggctcccactctcaccatcatggataatacgaacgcca
tcatattcatcatcattccaattctcaatcccaaattacaatctaaataacaatcagaga
ttatacctaatccctagattctattgttccacttcttcttcattggaccagcttgtagat
attccaccaccaccagcaataacaactacaggattgaaatgggaatcatttcggaaaaag
aaagttgtaatgcgtgttgggtatgtcggaactgattataaaggtttgcaaattcaacga
caagagacctcggcaatgactattgagggagaattagagaaagcaatttttaaggctggt
ggaatccgtgaaagtaattacggagatttgcaaaaaattggttggggtcggagtagtcga
acagataaagcagttcattcgttggcaactaccatctcattgaaaatggaaatccctgaa
actgcatgggtagatgacccttgggggattgctcttgcaaattatgttaactctaatctt
ccagacaatgccaaagttttcagtattttaccttcccaaaggagctttgatgcaagaaga
gagtgtactataaggaagtacacttacctccttccggtagaagttattgggattaagagc
gattgcagctccgcggaaatagatcatcatttgtcagagttcaatagtattttgaactct
tttgagggagaacatccctttcataactacacgatacggtcccagtacaggacacaacct
ccaggcggaaaagtggcgaaaacaagaagagcaataacatctaataaagcatcagattgc
aattctgagaaaattgatatagttgaaaaaggtgtggctgatggagtgattacttcatcc
aaagattctgacgagcatttagatgacattgtagaaaacagtgaagaggtgttgcaagtt
ccaggcacagtccaacctatccgtgctagatggctacatgagcctgatgagagtgacaaa
ataggcgcagctcacttcagaaagatacacgtatgttcttgcggagaagtagaaaaaatg
cagggaaagagttacatcgagatcaacattgttggggagtcattcatgttgcatcaaata
cgcaaaatggttgggacagcagttgcagtaaaaagaaagttactaccacgggatataatg
gtattgtccttgaacaagttcacaagattcatcctaccaattgctccatcagaggtactg
attctcagaggaaatcagtttacagtgataaatcgcaatggcaatgcaacacgtccagag
atgaagacgcttgtagaatccgaggaaatactaaaaggagtggataatttctacaaattt
caacttctgcctcagttaacacagttcttggaaccttcccaggctccatggaagcaatgg
gttgaaatccttgacgccaacacaggcatgccagatacagaaatggaagacgtcagaaat
gcttggaaagcatggaagcagagtttcaggcgcttctga
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