KEGG   Papaver somniferum (opium poppy): 113358037
Entry
113358037         CDS       T05758                                 
Name
(RefSeq) uncharacterized protein LOC113358037
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03022  Basal transcription factors
psom03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    113358037
  09124 Replication and repair
   03420 Nucleotide excision repair
    113358037
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psom03021]
    113358037
   03400 DNA repair and recombination proteins [BR:psom03400]
    113358037
Transcription machinery [BR:psom03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     113358037
DNA repair and recombination proteins [BR:psom03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     113358037
SSDB
Motif
Pfam: MAT1 VMAP-M5
Other DBs
NCBI-GeneID: 113358037
NCBI-ProteinID: XP_026457327
LinkDB
Position
3:complement(172306720..172308079)
AA seq 190 aa
MVVASGKPFAKEMAIRRRILNIYNKRDEDFSSLREYNDYLEEVEDMTTNLINGIDVAAIE
AKIAQYKKDNAEQITLSQARKAEELAAALQASKGGGAVMQSGDANNGDMNQSSLGFTGQY
VPAVTGAIGQPRPTGMAPQPVPLGHDVHGYAVDNEEMMRLREERGGRAGGWSTQLSRKRA
LVEAFSSIWV
NT seq 573 nt   +upstreamnt  +downstreamnt
atggtggttgcatcgggcaaaccttttgccaaggagatggctatacggaggagaatcttg
aacatatacaataagagagatgaagacttttcctcattaagagaatacaatgattatcta
gaagaagtggaggacatgacaactaacttgatcaatggcatagatgtagctgctatcgaa
gctaaaattgcccaatacaagaaagacaatgctgaacagataactctttctcaagctcgc
aaggcagaggagttagcagcagcgttacaagcaagcaaaggaggaggagctgtcatgcag
agtggtgatgcaaataatggggacatgaatcagagctctctaggttttactgggcagtac
gtgccagcagtcactggggcaataggtcaaccgcggccaacaggcatggccccgcaacct
gttccattaggtcatgatgtgcatggttatgcagttgacaatgaggaaatgatgaggctc
agagaagagagaggtggaagggccggagggtggagtacacaactaagcaggaaaagggca
cttgtggaagccttcagcagcatttgggtatga

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