Papaver somniferum (opium poppy): 113358165
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Entry
113358165 CDS
T05758
Name
(RefSeq) BRCT domain-containing protein At4g02110-like isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113358165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psom03032
]
113358165
03400 DNA repair and recombination proteins [BR:
psom03400
]
113358165
DNA replication proteins [BR:
psom03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
113358165
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
113358165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
Motif
Other DBs
NCBI-GeneID:
113358165
NCBI-ProteinID:
XP_026457479
LinkDB
All DBs
Position
3:complement(179156051..179162300)
Genome browser
AA seq
1571 aa
AA seq
DB search
MGEDYGGAGGSDSKIFDGVRFILLGFNPSEEAKVQSKLINGGGVNVGEYGSICTHVIVDK
IVYDDQRCVIARKDGKTVVNSVWVDHSFDVGMPVDSSLILYRPVKDLSGIVGAKSFIVCL
TGYQRQDREDIMRMVSMMGANFSKPLVANKVTHLICYKFEGEKYDLAKKMQRIKLVNHRW
LEDCLKAWEILPECDYNKSGHEIEIMEAEAKDSEDETEEYRDTAQLGVENVTDSSFKLHT
GSGISTSKGSDLATPVRERSINKQTSAAKGLLDTSENITSKISKKESRVGDVAESSSKLP
GGSDGLNLVGSGLTTPVRKTSSVHLHGSTAKGLIDTSENVDSESRLSINAGKSIVAEKTT
NPLVANQQDFGSLSSGAYRNDDTGSRGNKTPSSKTGKRPFSSDATNTVTISHTKKMHKTS
PVPYFSGEHSSHLRSSPLGGSETNNDGFGMSPLKSDQVKNKLDFGEVEDQSNESELHHSK
LKDGTLTPKKKKGLSCSSPKSSNTGKDGFGISPLKADQVKDNLDIGHIENQKNGSELHHS
KLEGRAVTPMKKKSLSSPSHESLKKGSPDSRTFGATGTVASTTLEREIVRPEMESSSTPS
DRSYQMDADINTTKNQSVTLKRKLGLSGTSSGSTKKRSPYSITSGTGSTVAGATPEGDIS
IALETRPSPALANSSHAAEAIANSSANEPVKLAKNKSSSVKKKSKKCGLPVSTNMISDDL
KSPLQQNVSVPSAAKTPETSLKELGQADLVSSPDFGDFRASRSAGLDTKASSPDSRTPET
QADKSVGSVNIGLNKGKKNGPSSRSGTKTKSLGTRLLSAASAKERKGTLNLDQATTTREG
SLISEEGTNKAVQEKLSNVQTETIGLPRDVDKVVDQNSNHFPSSVNMGDALDDETEAPED
ENAVKSFSQEVAQLSCKADVGIKENSEKIQQSGSKVNSHRSLMDGEKMISGVDREDVKKN
KEDQAKKVTGGVHSSNRANKATVSSSKDVVNDEKLEMEKTNEVSNPKSRVQRRTVSVKTA
EEAISVEENKTIETEGPTVRSATYVRKKVVSKSLKKPKQANKMVTEASQEEIPVSEVKPP
SSEDQRNGVSAVKEVVVPREIKDSVDNENNKTRAEMVATKRRASLASKTKKSKKEKPIND
LNETKSAKRSTVNAGEHENETVVEAKRRVIHASNTKESNTEIPLDGEKETKTAKNRPNVK
SGEHENVVPKPDIKCKQSNKKAESSTYSNIIQAGRVSKPLNSQPMLFILSGHRLQRKEFQ
QVIKRLKGRCCRDSHNWSYQATHFIVPDPVRRTEKFFAAAASGRWILKTDYLTACNQAGK
FVEEEPYEWSKTGLNEEGTISFEAPRKWRQLKERTGHGAFHGMRIVVYGECIAPPLDTLK
RVVKAGDGTILATSPPYTKFLKSGIDFAVITQGMPKADLWVQEFIRNEIPCVVADYLVEY
VCRPDYALDKHVLYNTNVWADKSLANLEMRSKEIAEPSSPSAVNDEPSDSGDVPCQVCGS
RDREEVMLICGDESGSIGCGIGTHIDCCNPPLKSIPVEDWFCPNCSITLNCKKDPPKTSK
KKVSSSMRGKK
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagactatggaggtgcagggggtagtgattcgaaaatattcgatggagttcgt
ttcattcttcttgggttcaatccatcagaagaggctaaagtacaatctaaacttattaat
ggtggtggagttaacgtcggtgaatatggttctatttgtacacatgttattgtcgacaaa
attgtttatgatgaccaacgttgtgttattgctagaaaagatggtaaaacggtggtgaac
tcggtatgggtggatcatagtttcgatgttggaatgccagtggattctagcttgattttg
tacagacctgtaaaggatttgagcggaattgtgggtgcaaaatcttttattgtatgcctg
acaggataccaaaggcaagatcgtgaagatataatgaggatggtaagtatgatgggggca
aacttctccaagcctctggtagcaaacaaagtcactcatctcatttgctacaaatttgag
ggtgagaagtacgatcttgcaaagaaaatgcagagaataaagcttgtcaatcatcgatgg
ttggaggactgtttaaaagcttgggagatacttccagaatgtgactacaacaagagtggt
catgaaatagagataatggaggctgaagctaaggattctgaagatgaaactgaagaatat
agagatacggcgcagttaggggtggaaaatgtcacagacagttcatttaagttgcatact
ggaagtggtatttcaacttcaaagggttctgacttggccacaccagtaagagaaaggtcc
atcaacaagcagacatctgcagctaaaggcttgttagatacctccgaaaacattacttca
aaaattagtaaaaaggaatcaagggtgggagatgttgcagaaagttcttctaagctgcca
ggaggaagtgatggtctgaatttagtgggttctggcttgaccacaccagtgaggaaaaca
tctagtgtgcacctacatggatccactgctaaaggcttgattgataccagtgagaatgtt
gattcagaaagtagattatcaattaatgctggaaaatcaatagtagctgagaaaactaca
aatccactagttgcaaatcagcaggactttggttctctcagcagtggagcttatcgtaat
gatgatactggtagcaggggcaacaaaaccccaagctctaagactggtaaaagaccattt
agttctgatgctacaaatactgttactataagtcatacgaaaaaaatgcacaagacctct
ccagttccgtatttctctggggagcattcaagtcatttacgcagctctcccctagggggt
tcggaaacaaataacgatggtttcggaatgtcaccactaaagtccgaccaagtcaagaat
aaactggattttggggaggttgaagatcaaagcaatgagtcagaattacatcactccaaa
ctgaaagatggtacacttactccaaagaaaaaaaagggtctttcctgttcaagccccaag
tcttcaaacacaggcaaagatggttttggaatttcgccactaaaagcagatcaagtcaag
gataacttggatattggccatatcgaaaatcagaaaaatgggtcggagttacatcactcg
aaactagaaggaagggcagtgactccaatgaaaaagaaatccctttctagtccgagccat
gaatccttaaagaaagggagtcctgattcaagaacttttggagcaacaggtacagtagca
agtactacacttgaaagggagattgttcgaccggagatggaatcaagttctaccccgagc
gatagaagctatcaaatggatgcggacatcaacactacaaagaatcagtcggttactcta
aaaagaaagctgggtctttctggtacgagctcaggatctacaaagaaaagaagtccatat
tcaataacttctggtactggaagtacagtagctggggctacaccagaaggagacattagt
attgcactggaaacaagaccaagtcctgcccttgccaatagtagccatgcagctgaagct
attgcgaattcttcagcaaatgaacctgttaaactggcaaaaaataagtcttcaagtgtc
aaaaagaaatccaagaaatgcggattgcctgtttcaacaaatatgatttctgatgatctg
aaatctcctttgcagcagaatgtgtcagtcccatctgcagcaaagacacccgagacatca
ttaaaggaattgggacaggctgacttggtttcttctcctgacttcggtgatttcagagct
agcagatcagcaggcctggataccaaggcctcatcacccgattctcgaacgcctgagaca
caggctgataaatctgtaggttctgtcaacataggtttaaataaaggcaaaaagaacgga
ccatcttcgagatcagggacaaaaacgaaaagtttgggcactagactgcttagtgcagct
agtgctaaggaacggaaaggtactcttaacttggatcaggcaactaccacacgtgaaggt
tcgttgatttcagaagaaggcacaaataaagcagtgcaggagaagctgtctaatgtacaa
acagagacgattgggctgccgcgagatgtggacaaagttgtggatcaaaactccaatcac
ttcccttcatctgtgaatatgggtgatgctttggatgatgaaactgaagctccagaggat
gagaatgctgtgaaatcatttagtcaggaggtggctcagctatcctgtaaagctgatgta
ggcataaaagagaactcagaaaagattcagcagtcaggaagtaaagtaaatagccatcgc
tcactgatggatggtgagaaaatgatttcaggagtggatagggaggatgttaaaaaaaat
aaggaggatcaagctaagaaggtgacaggaggagtgcattcttcgaaccgggcaaataaa
gctacagtatcttcctcgaaagatgtagtcaatgatgagaagttggaaatggagaagaca
aatgaagtttcaaatcctaaaagtagagttcagaggagaactgtatctgtgaagacagca
gaagaagcgatttctgtggaggagaataagaccattgaaaccgaaggtccgactgtacgt
tcagcaacatatgtgaggaaaaaagttgtatcgaagtcgttaaaaaaaccaaagcaggct
aataaaatggttactgaagccagtcaagaagaaatccctgtgagtgaggtgaaacctccg
tcaagcgaggatcagagaaatggtgtttcagccgtgaaagaagtagttgtacctcgggag
atcaaggacagtgtagacaatgagaacaataaaacgagggcagagatggttgcaaccaaa
agaagggcaagtcttgcgagcaaaaccaagaagagcaagaaagagaaacccataaacgac
ttaaatgaaaccaagtcagcaaaacgttccactgtcaacgcaggagaacatgaaaacgaa
actgtggttgaagcaaaaaggagggtaattcatgcaagtaataccaaagagagtaatact
gagatacccttagatggcgagaaggagaccaagacagctaaaaaccgtcccaacgtcaag
tcaggagaacatgaaaatgtagttcctaaacctgatattaagtgtaagcagagtaataaa
aaggcagaatctagtacttattcaaatataattcaggcaggaagggtttcaaagccccta
aactctcaacctatgttgtttatacttagtgggcaccgtctacagagaaaggagtttcag
caagttattaagcgtttgaaaggacgatgttgcagagattctcacaattggtcataccaa
gctacccactttatcgtcccagatccagttagaagaacagagaaattctttgctgctgca
gcatcaggcaggtggatactaaagacagattacttaactgcttgtaaccaggctgggaag
tttgtggaggaagagccatatgagtggtctaaaaccggccttaatgaggaaggtacaatt
agctttgaggctcccagaaagtggcgccagttaaaggaaaggactggtcatggtgctttt
catggaatgcgaattgttgtctatggagaatgcattgctccaccgttggataccctgaaa
cgtgtggtgaaagcaggcgatggtaccattcttgcaacatcgcctccttacaccaagttc
ctcaaatccggaattgatttcgcggttataactcagggaatgccgaaggctgatttgtgg
gttcaagaattcataagaaatgagatcccatgcgtagtggctgattacttggttgagtat
gtatgcagacctgattatgcacttgataagcatgttctttacaacaccaatgtatgggca
gataagtcattagcaaacctcgaaatgcgctctaaagagattgccgaaccgtcttcgcca
tctgctgttaacgatgagcccagtgacagtggtgatgttccttgccaagtttgtggatct
cgtgaccgtgaagaggtaatgcttatatgtggtgatgaaagtggatctatagggtgtgga
attggtactcatattgattgctgcaatcctcctttgaaatctattccagtggaggattgg
ttttgtccaaactgtagcataacattaaactgcaaaaaggatcctccaaagacttctaag
aagaaagtgtctagtagtatgcggggtaagaagtaa
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integrated database retrieval system
