Papaver somniferum (opium poppy): 113358434
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Entry
113358434 CDS
T05758
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
113358434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psom03400
]
113358434
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
113358434
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
NadA
TPR_TNPO3_IPO13_4th
Motif
Other DBs
NCBI-GeneID:
113358434
NCBI-ProteinID:
XP_026457784
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All DBs
Position
3:202042984..202045675
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AA seq
655 aa
AA seq
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MEEDSDGRSGKARMLIEKATNSVEPEVNPRLVKAIKFVVRSSDSEIKLAVETLMENMKKN
HSQVRYLALFIVDELFMRSKLFRSLFVVKFDLFLSLSIGFRRDLPLPAPAPIATRLRSKA
TEFLEKWNTSFGLHYRQIRLGFDYLKNTLNFQFPNLQANAARIQQERREREIRSKEILLK
KFETLSQNLSSIKDEIQITVEEIRQCLDILRTNEADDTMLDTPEEDEVEDFRCSSLMEIR
LESLRESEKLRETSENKVIFDALRELYKLLVTKHLVSVQEWISVLIRVEPEDTSFRDSML
REFIDLQNHLKSVRKTCENSGCALTDSKNDKEEDFWEEGKVEVCSYGSSSTPAKANKDAA
CTSAVITKSNITPRQITDSNASKRLDGEDEDSESNPLRRKLLSEAPVVNWGSSLSNWRSN
RDVLANQRGLELEGHWGRVDYDAVIPAEKIAELNVQASVYKEEHVDIQPCLAPLRKGGVC
QRRDLKICPFHGPVIPRDTEGNPINQVSLAEKEITKMETEEVIAQQLAEQAVKNVREREK
DEVKKRVTDRKLLSRAKLAKVREHNEVVLRDAAVASTSRSAFVGQDGETQHQTTRSSIKG
KKPSLASMLRKKVTSKDRLSQRLLNTRATDATVRQLTVGEDSKYREAYPNQWKRT
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagacagtgacggccgatcaggtaaagcgagaatgttaatagagaaagcaaca
aattcagtagaaccagaagtcaatcctcgacttgtgaaagctattaaatttgtcgttcgt
tcttcagactccgaaattaaactagcagttgaaaccctaatggaaaatatgaaaaaaaat
cactctcaggtgaggtatttagcgcttttcatagttgacgaattgttcatgcggtcgaag
ctgttcagatctctctttgttgtgaaatttgatctatttttgagtttgagtattggcttc
agaagagatctgccacttcctgctcctgcacctattgctacccgtttacgctctaaagct
actgagttcctggagaagtggaacacttcttttgggcttcattacagacaaattcgattg
gggtttgattatttaaaaaacaccctgaactttcagttccctaatcttcaggcaaatgca
gctcggatacagcaagagagaagggaaagagagatcagatcaaaagagattttgttgaag
aagtttgaaactttaagtcaaaatctctcatcgattaaggatgagattcaaataactgtt
gaagagataaggcagtgtttagacattcttcgtacgaatgaagctgatgacaccatgctg
gatacccctgaagaggatgaggtcgaggatttcaggtgttcctccttaatggagattcgc
ctcgagtccttgagagaaagtgaaaagctacgtgagaccagcgagaataaggtgatattt
gatgcattaagggaattgtacaagctcctagtaacaaaacacttggtttcagtgcaagag
tggatatctgttcttattagagttgaaccagaagacaccagtttcagagattccatgtta
agagaattcatagatttacaaaatcatctcaagtcggtgagaaagacatgcgaaaattct
ggttgtgctcttacggattcaaaaaacgacaaggaagaggatttctgggaggagggtaag
gtagaagtatgcagttacggaagtagcagcacgcctgcaaaggcaaacaaagatgctgcc
tgcacgtcggctgtcattacaaagtcaaatataacccctagacagattactgattctaat
gccagcaagaggttagatggagaagatgaagactctgagtcaaacccgctaaggagaaag
cttctgtctgaagctccagtggtaaattggggatcttccttgtctaactggagatcaaac
cgggatgttttggctaaccaaagaggattagagcttgagggtcattggggtagggtagat
tatgatgcggttattccagcggaaaaaattgcggagttgaatgttcaagcaagtgtatac
aaggaagagcatgttgatatccaaccgtgccttgctcctctgagaaaaggaggagtctgt
caaagaagagatttaaagatatgcccatttcatggacccgttatacctagagatactgaa
ggaaatccaataaatcaagtttcattggcagaaaaggaaattaccaaaatggaaactgaa
gaggttattgctcaacaattagcagaacaggcagtgaagaatgttagggaaagagagaaa
gatgaagtaaagaagagagtgactgataggaagttgttgagccgtgcgaaacttgccaag
gtgcgtgaacacaatgaagttgttctacgtgatgctgcagttgcgtcaacctcacgctct
gcatttgttggacaagatggggaaacacaacatcagactacaagatcttctataaagggt
aaaaaaccgtcactagcgtctatgctgcgtaagaaagtaacctcaaaagatagattgtca
cagagacttttaaatacacgtgctacagatgctacagtaaggcagttaaccgttggtgaa
gattccaagtacagagaggcctatccaaatcaatggaagagaacatga
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