Papaver somniferum (opium poppy): 113358529
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Entry
113358529 CDS
T05758
Name
(RefSeq) protein PIR-like isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113358529
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113358529
Factors involved in mRNA localization
Other mRNA localization factors
113358529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
WASH-4_N
Motif
Other DBs
NCBI-GeneID:
113358529
NCBI-ProteinID:
XP_026457906
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All DBs
Position
3:complement(207664273..207676951)
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AA seq
1284 aa
AA seq
DB search
MAVPVEEAIAALSTFSLEHDQPEVQGLAASLSTERCATNSPIEYSDVSAYRLSLSEDTKA
INQLNNLIQEGREMSSVLYTYRSCVKALPQLPDSMKQSQAELYLETYQVLDLEMSRLREI
QRWQSSAAAKLAADMQRFSRPERRINGPTITHLWSMLKLLDVLVQLDHLKNAKASIPNDF
SWYKRTFTQVSIQWQDTDMMREELDDLQIFLSTRWAILLNLQVEMFRVNNVEDILQVLII
FCVESVELDFALLFPDRHILLRVLPVLLVLATSSEKDGESLYKRVKINRLISIFKNDPVI
PAFPDLHLSPAAIMKELSMYFQKFSTQARLLALPAPHELPPRETQDYQRRYLIINHIGAV
RSEHDDFVIRFGSSMNQIVLLKSNDGADVELCKEVKGNMYDMVVEGIQLLSRWTGRIWEQ
CAWKFSRPCKDVPAESHEISASVSDYEKVVRWNYTTEERRALVELLSYIKSIGSMMQRCD
TLLADALLETVHAEVQDFVQNKLAAMLKTTFRKKKDLSRILSDMRTLSADWMANTNKPEA
ETQPLQHGDESKGNFFYPRSVAPTTAQVHCLQFLIYELVSGGSLRKPGGLFGNSGAENSI
NDLKQLETFFYKLSFFLHILDYTVTIGTLTDVGFLWFREFYLESSRVIQFPIQCSLPWML
VDHVIESQNAGLLESILMPLDIYNDSAQHALVVLKQRFLYDEIEAEADVCFDQLVLKLSE
LIFTYYKSWAASELLDPSFLFALDNGEIYAVQPMRFNALLMMTRVKVLGRTIDLRSLIAE
RMNKMFRDNLEFLFDRFESQDLCAIVELGKLLDILKHSHELLLKDLSIDSFNLMMNEMQE
NISLVSFSSRLASQIWSEMQNDFLPNFIFCNTTQRFMRSSKVSLVPIQKPSVPSAKPNFY
CGTQDLNMAHQSFARLHSGFLGMPHIFAIARLLGSRSLPWLIRALLDYISNKIAAVEPMI
TGLQEVLPKSIGLLPFDGGVAGCQRIVKENLNWGSNSELKAEVLRGIKEIGSVLCWMALL
DIVLREIDTTNFMQTSPWLGLIPGADGQILYSLNVGDSPLVTLFKSAAAAAESYTNCSSL
SSLHTISKQAEAADLLYKANINSGSLLEYTLAFTSATLDKYCSKWSAVPKTGFIDITTSK
DFYRVYSGLQFGYMEDSVQTSANNHEVLGDSVAWGGCTIIYLLGQQMHFELFDFSYQLLN
VAEVETATITQTLRSANYVQMWENLLEAMKKERRLNNHVFSMLRARCPLEDKTACAVKQS
GAPLHRIKFENTVSAFETLPQKGA
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggctgttccagttgaagaagccattgctgctctttcaacattctcactagagcatgat
caaccagaggtgcagggtttagcagctagtctatcaactgaaagatgtgcaactaatagt
cctattgagtatagtgatgtttctgcataccgcctatcgttgtcagaggacacgaaagcc
ataaatcaattgaacaatcttatccaagagggaagggaaatgtcatctgttctctacact
tatcgcagttgtgtcaaagcacttcctcagcttcctgattctatgaagcagagtcaggca
gaattatatttggaaacttatcaagttctggacttggagatgagtcgtcttcgtgaaatt
caacggtggcagtcatcagctgctgccaaactagcagctgacatgcaacggttttcaagg
cctgagcggcgcataaatggccctacgataacgcatctatggtccatgttgaagttattg
gatgttctggttcaactcgatcatctgaaaaatgcgaaagcaagcatacctaatgacttt
tcttggtataagagaacatttactcaagtcagcattcagtggcaagacactgatatgatg
agggaagagttagacgacttacagattttcttaagcacgagatgggctattttactgaat
ttgcaggttgaaatgttccgcgtgaacaatgttgaagacattcttcaggttctcataata
ttctgcgttgagtctgtggagttggactttgcgcttctttttccagatcgtcacattctt
cttcgagttttgcctgttctcttagtattagcaacgtcttctgagaaagacggcgagtcg
ctttacaagagagtgaaaatcaaccggctcattagtatatttaagaatgatcctgttatc
ccagcattcccagatcttcacctctctcctgctgcgatcatgaaagagctgtcaatgtac
tttcagaaattctcaactcaagctcgtcttcttgcgctgccagcaccgcatgagcttcca
ccccgcgagacacaagattatcagagacgttatttgatcatcaatcacattggagcagtt
cgctctgagcatgatgattttgtcattcgcttcggctcatccatgaatcagattgtgtta
ttgaaatcaaatgatggtgcagatgttgagttgtgcaaggaagttaagggaaacatgtat
gatatggttgttgaaggtattcaacttctaagtagatggactggacgcatttgggagcaa
tgtgcatggaagttttcccgtccctgcaaagatgtgcctgcagaatctcatgagatttct
gcatcagtttctgactatgaaaaggtggttcgttggaattatacaacagaggaaaggagg
gcattagtagaacttcttagctatataaagagtattggatcaatgatgcagcggtgtgat
acattgttggccgatgccttactggaaacggtccatgctgaagtgcaagattttgtgcag
aataaattagcagcgatgctaaaaactacatttcggaaaaagaaggacctttctaggata
ctttctgacatgcggaccctttcagctgactggatggcgaatacaaacaagcctgaagca
gagacacaacctctacagcatggtgacgaaagcaagggaaactttttttatcccagatct
gttgctccaacaacagctcaggttcactgcctacagttccttatttatgagcttgtatct
ggtggtagtttaaggaagcctggaggactcttcgggaatagtggggcagagaattccatt
aacgatctgaagcagttggagaccttcttttacaaattgagctttttcctgcatattttg
gactatacagtgacgattggaacgttaacagatgttggttttttgtggtttagagaattt
tatttggagtcttcccgtgttatccagtttcctattcaatgctctcttccttggatgctg
gtagatcatgtaattgagtcccaaaatgcaggtcttcttgagagcattctgatgccactc
gacatctataatgattctgcgcaacatgcactggttgtgctcaagcaacggtttttgtac
gatgaaattgaagctgaggcagatgtttgttttgatcagcttgttttgaagttaagcgag
ttaattttcacttactataaaagttgggcagcaagcgaacttcttgatccatcgttcctc
tttgctttggacaatggtgaaatatatgctgtccaacctatgagattcaatgcgttatta
atgatgacaagagtgaaggtactgggtaggaccattgatttaaggagcctaattgctgaa
cggatgaacaaaatgttcagagataatctggagttcttatttgatcgttttgagtctcag
gatctgtgtgccattgtggaactagggaagctcttggatattttaaagcactcgcatgaa
ttgcttttaaaagatctttctatagactcgttcaatctcatgatgaatgagatgcaagaa
aacatatctcttgtttctttttctagtcgacttgcttctcagatatggtcagagatgcaa
aatgacttcctgccgaacttcatcttttgcaatactactcagcggttcatgagatcgtca
aaagtgtcgcttgttcccattcaaaagccttcagttccctctgcaaagccaaacttttat
tgtgggactcaggacttgaatatggctcatcagagttttgcacgactacatagtggattc
cttggaatgcctcacatatttgccattgcaagacttttagggtctaggtcattgccttgg
ctaattcgagctttactggattatatatcaaataagatagcagcagtcgagcctatgatt
acaggactacaggaagtattgccaaaatctataggattgcttcctttcgatggaggtgtt
gcaggttgtcagagaattgttaaagaaaatttaaattggggatcaaattcagaacttaaa
gcagaggttcttcgtggcataaaggaaattggaagtgtattatgttggatggcgctactt
gatattgtgttgagagaaattgacaccacgaatttcatgcaaacttcaccatggttgggt
ttgattcctggagctgacggtcaaattttatactctctaaatgttggagatagcccactt
gtcaccctcttcaaatctgcagcagctgctgctgagtcatacactaactgttcaagtttg
tcatcgctccacacaatatctaaacaagcagaagctgcagatctgttatacaaagccaat
atcaattcaggaagcttattggaatatacccttgcatttacaagtgcgacattagataaa
tattgtagtaaatggagtgcagttcccaagaccgggttcattgacattactacttcgaaa
gatttttatcgtgtatatagcggtcttcaatttggatacatggaagattctgttcagaca
tcggcaaacaatcatgaagtcttgggtgattcagttgcttggggaggttgtacaataatt
tacttgcttggtcaacaaatgcactttgagctctttgatttctcctaccaactccttaac
gttgctgaagtagaaactgcgacaatcacgcaaacccttagaagtgctaattatgtgcag
atgtgggaaaatctattagaagctatgaaaaaagaacgtaggttgaacaaccatgtgttt
tcaatgttgcgggcacgttgcccacttgaggataaaacagcatgtgcagtcaagcaaagc
ggagctcctcttcatcggatcaaattcgagaacactgtttctgcatttgaaacacttccg
cagaaaggtgcttaa
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