Papaver somniferum (opium poppy): 113358681
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Entry
113358681 CDS
T05758
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic-like
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psom01009
]
113358681
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psom04131
]
113358681
Protein phosphatases and associated proteins [BR:
psom01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113358681
Membrane trafficking [BR:
psom04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
113358681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
Syndetin_C
COG2_C
DUF1400
Motif
Other DBs
NCBI-GeneID:
113358681
NCBI-ProteinID:
XP_026458093
LinkDB
All DBs
Position
3:complement(218026505..218037129)
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AA seq
1029 aa
AA seq
DB search
MDSSQSGGRYENLRIKRTTSTASSTKSDPSTPTVLPSPSSSTSYGGSGSQNLSSILNNPR
KSTSVYGSDSSSLFTGWFSSSTSSSVDFSSTPLVLKQQPGSEVSKSDFKSYLNVINEPYG
RFEDIRNHSNKENLEIDEKVEQQEEEEIDKLGFSSTTVGQGEALVNCLREVPSLYFKEDF
ALEEGPTFEVACPFKTILENIDLQEKLSHYLDTVELHLVKEISLRSNSFFEAQGQLYGLN
IEIVEACGRIRELKETIRLLNKELVEPAKQIQDLNSTRINLIALQQKLTLILYVNQALSA
LKLLVAAADCAGALDVTDDLRNLLDTDELAGLHCFRHLRDQLATSIQDINRILSAEFMCA
SIYDVKDGGSIILARIKAGNTSLTNGKDDDFKMDEEEMFSFRDRLLPFIVGLLRTKELPS
ELRNYREALTANMKTAIKTTVAELLPLLVAQPMESGLMTGERTPDADGGGASLAGKLRSL
ASESFIRLLDAIFKVVQVHLVRAAEVKKAVEWIMSNLDSCYASDSISAANAEAGQELSPY
SLQKNASKSPTTSGKANDISSPNMSRNLRAEVLRENTEAVFAACDAAHGRWAKLLGVRAL
LHPKLRLQEFLSIYNITQDFISATEKIGGRLGYSIRGTLQSQSKAFVSYQHDSRMAKIKA
VLDQETWTSVDVPDEFQAIVKSFLSSEVLTNGGQTEALGSTDISSKADGSPVVLPSQLIG
QNESNETSADSTGQIKSPVSTGEGVAGNNNTKESAKSASQTLTYGAVGYHMVNSGLILLK
MLSEYVQMNNFLPALSFEIVQRVVELLKFFNTRTCQLVLGAGAMQVSGLKSITAKHLALA
SQVISFMHAIIPEIRTVLFLRVPESCKATLMSEIGRVAQDYKVHRDEIHSKLVQIMRERL
LVHLRGLPQIVESWNRPEDNDSQPSQFVRSLTKEVGFFQRILSRTLHENDVQAIFGQVVQ
IFHTQISDAYSGLEITTPQAKNRLRRDIQQILACIRSLPTDNTFDKDGVRNSGKLDEFLL
QKFGAESSQ
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggattcttcccaatcggggggaagatacgaaaatctccgaatcaagcgaacaacttca
acagcttcttctactaaatctgatccaagcacaccaacagttctaccatcaccatcatca
tcaacatcatatggtggcagcggaagtcaaaatttatcttcaattctaaacaatccacgt
aaatcaacttctgtgtatggatccgactcttcttcattgtttactggttggttttcttct
tccactagctcttccgttgatttctcatccacaccattagtacttaaacaacaaccaggt
tctgaagtttctaaatcagatttcaaatcgtatttgaatgtaattaatgaaccgtatggt
agatttgaagatattcggaatcattcgaacaaagaaaatcttgaaatcgatgagaaagta
gaacaacaagaagaagaggaaattgataagttagggttcagtagtactactgttgggcaa
ggagaagcgttagtgaattgtttaagagaagttccgtcattgtattttaaagaagatttt
gcattagaagaaggaccaacgtttgaagttgcctgtccatttaagacgatattggagaat
atcgatttgcaagagaaattatcacactatttagataccgttgagttacatttagtgaaa
gagatttcgttaagatcgaactcattttttgaagctcaaggacagttatacgggttaaat
attgagattgttgaagcgtgtggacggatccgtgaattaaaagagacaatcaggcttttg
aataaggagttagttgaacctgctaaacagattcaagatttgaattcaacaagaataaat
ttgattgctctgcagcagaaacttacacttattttatatgttaatcaagcgctgtcggct
ttaaaactgctagttgcagcagcagattgtgcaggagctttggatgtaactgatgacttg
cgcaatttactggatactgacgagcttgctggtctccattgcttccgtcatctacgtgat
cagttggcaacatccatccaggatataaaccgcattctttcagcagagttcatgtgtgct
tccatatacgatgtcaaagatggcgggtctattattttggctagaataaaagcagggaat
actagccttaccaatggaaaagatgatgattttaagatggacgaggaagaaatgttcagc
tttcgtgatcgtcttctaccctttatcgttggattgctcagaactaaagaactcccatct
gagctgaggaactaccgtgaggcacttactgccaacatgaaaacagcaattaagacgaca
gttgcggagttgcttccacttttggttgcccaacccatggagtctggtttgatgacggga
gaacggacacctgatgctgatggtggaggcgcgtcactcgcaggcaagttgcgtagcctt
gcatccgaaagcttcattcgacttttggatgcgattttcaaggttgtacaggtacattta
gtacgggcagctgaagttaaaaaggctgtcgagtggatcatgtcgaatctggatagttgt
tatgcttctgattctatttcagcggcaaatgcggaagcaggtcaagagctctcaccttat
tctcttcagaagaatgcttctaaaagcccaactacatcgggaaaagcaaatgacatctca
agtccaaatatgtcaagaaatttacgtgctgaagtgctgcgggaaaacaccgaagctgtg
tttgcagcttgcgatgcggctcatggtagatgggctaagctcctaggtgttcgtgctctt
ctacaccctaaattaagattgcaagagttcttgagcatctacaacatcactcaggatttt
atatcagctacagagaagattggtggtagattgggctatagcataaggggaacactgcag
tctcagtcgaaagccttcgtttcctaccagcatgactctcggatggcgaagattaaggca
gttcttgaccaagaaacatggacttctgtggacgtcccagatgaatttcaggccattgtc
aagtcgtttctatcttcagaagtgttgactaatggcggtcaaaccgaagctcttggtagc
actgatatttcttcaaaagctgatggttcacctgtggtgctaccatctcagcttattggg
cagaatgagtccaatgaaacctccgctgatagcacaggacaaattaaatcacctgtttca
actggggaaggtgttgctggtaataacaacacaaaggaaagtgcgaaatccgcatctcaa
accctcacttatggtgccgttggctatcacatggtgaacagtggtttaattcttctgaag
atgttgtctgaatacgttcagatgaataactttttgccagcactgtcatttgaaattgtc
caacgtgttgtggaacttttaaagtttttcaacacaaggacgtgccagcttgttttagga
gctggtgccatgcaggtgtcagggttgaaatcaattacagctaaacacttggctctagca
agtcaagttatcagttttatgcatgccattattcctgaaatcagaactgttctttttctg
agagtaccagagtcttgcaaggcaacattaatgtctgagattggtcgagtagcccaggat
tataaggtacaccgggatgagattcattcaaagctagttcagataatgagagaaagattg
ttggtacatctcagagggttgccccaaattgttgagagttggaataggccagaggataat
gattcacagcctagtcagtttgtgcgatcccttaccaaggaagtcgggttttttcaacgt
atcttgtctagaactctacatgaaaatgatgttcaagctatttttgggcaagtggttcag
attttccacacacaaatttcagatgcatattctggtctggagattaccactccccaagca
aagaacagattgcgtcgggacattcaacaaattctcgcttgcattcgttctttgcctact
gacaatacttttgacaaagatggtgtgcggaactcagggaaacttgatgagtttttgttg
caaaaattcggagctgagagtagtcaatga
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integrated database retrieval system
