Papaver somniferum (opium poppy): 113359226
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Entry
113359226 CDS
T05758
Name
(RefSeq) polygalacturonase QRT2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00040
Pentose and glucuronate interconversions
psom01100
Metabolic pathways
Module
psom_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113359226
Enzymes [BR:
psom01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
113359226
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Motif
Pfam:
Glyco_hydro_28
Beta_helix
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
113359226
NCBI-ProteinID:
XP_026458681
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Position
1:complement(208697729..208699672)
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AA seq
374 aa
AA seq
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MIIPAFTKAWADACAATAGIPKLVVPKGKTFYVGPTSFMGPCKAKNVTFELGGTIVAPQN
PSAWDTAKGGSGTWIVFNGVTGLLVNGGGVFDGRGQGWWEKSCHQNRHLNAPGCTKIQPA
AVNFWGTNGGAFRDITVTNSPMFHITLLKLEGFEVYNVKINSPEGSPNTDGIHTQDVKQV
TIADSQFRGGDDCVSIGDRSSFVYVRNCHCGPGHGVSIGSLGKGGKNADVEEIHVERIEF
VGTMFGARIKTYKGGKGYCRKISYKNSNFTNVMNPIFIDQFYLDVGVSDTSNAVSAVSIS
DVTFEGLTGTTDVKVPAAITLKCSEAVPCTGIKMNNINLTPAVPGTKLTTNCTNAKGAIL
GKVEPAVTGLISSA
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgataatcccggcatttacgaaagcgtgggctgatgcatgcgcagcaacagcagggata
ccaaaattggttgttcctaaaggaaagacattttacgttgggccaacttcatttatgggt
ccttgcaaggccaaaaatgtcacctttgagcttggtggaacaattgttgcaccccaaaat
ccctcagcatgggatactgccaagggtggttcaggaacatggatcgtattcaatggtgtg
actggtctcctagtaaatggaggtggtgttttcgatggacgtggtcagggctggtgggaa
aagtcctgccatcaaaatagacatctaaacgcaccaggatgcaccaagatacaaccagct
gcggtaaacttctgggggacaaacggtggtgcattcagagacatcacggttacaaacagt
ccgatgtttcatataactctcttgaaactagagggttttgaagtctataatgtcaagatt
aactcccctgaaggtagtcccaataccgatggtattcacacccaggatgtcaaacaggtc
accattgctgacagccagtttaggggaggtgacgactgcgtctcaattggagatcgaagt
tcatttgtctatgtccgcaactgtcactgcggacctggacacggagtaagtattggaagc
ttaggtaagggtggaaaaaatgcggacgtagaggagatccatgttgagagaattgaattt
gtcgggaccatgttcggtgctagaatcaagacttacaagggtggaaagggctattgccga
aagatttcatataagaacagcaatttcactaatgtgatgaatccaatattcatcgatcaa
ttctaccttgatgtaggagtgagtgatacatcgaatgcggtgagcgctgtgagtatcagc
gacgtaactttcgaaggtttaacaggaacaaccgacgtaaaagtacccgcagctatcact
ttgaaatgtagtgaagcagttccttgcaccggtattaaaatgaacaacatcaacttaaca
cctgcggtacctgggacaaagcttaccacaaattgtactaatgccaaaggagccattctt
ggaaaagttgaaccagccgtaactggtctgattagttcagcataa
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