Papaver somniferum (opium poppy): 113360787
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Entry
113360787 CDS
T05758
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04120
Ubiquitin mediated proteolysis
psom04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113360787
04120 Ubiquitin mediated proteolysis
113360787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113360787
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113360787
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
U-box type E3
113360787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
DYN_lid
Motif
Other DBs
NCBI-GeneID:
113360787
NCBI-ProteinID:
XP_026460034
LinkDB
All DBs
Position
3:228067706..228070591
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AA seq
961 aa
AA seq
DB search
MATGNPKRSPEVIEDILIQRIFLVTLTSTDNNQVMYLEKMSAEKLREGKSLLLNRDMMEE
ALVGKLSGQFSGESLFQYLTGCYGRAFEEGKKISNMKDVDLQPSLQNCVIKPAKKLLARY
CQIDLCNPDMFPHSEKISAGSALLPIIFNAVSENNTACGNEFLNGFFTETDDYEIMAPIF
KNLYDSLNHEISKVNDSPLGNFVQPLKALRMLVGFPNGGKALVNHPLWLPKGEDVNGRVI
EKESILGSFFHISALLDLTSTADDINLLLCPMTLPMNALYDGLLEVLLYLLKSNEDVREC
VMGYIGNVIEKNSSRAHMHVDMATSASSGMFFNLSAVMLRLCMPFLKEITKRDKIDAKYV
SNSTRLDFRALTALHASPEESGAWADENKLKSGNSQYSFICECFFMTARVLNLGLLKLIS
QYRDLEKQVSDSINELSLMKEQPPSKYFKEEIARLSKLIELQSKINSGYESHLLEDCNIQ
RALSFYRLMIVWLADSVGGFKMPLPSGCPMEFGCMPEQFVDDAMELLIFVSEIIPEKLDP
GLLNDFINFIIMFIGSPNYIRNPYLRVKMLKVLNCWTIKRNDSDTAVSPFEGHQLALGQY
LVGSVLKLYVDIEFTGSDTQFLGRFFIRDEIAKFLKYLWEEPSHLDAWTKFAKEEEKGVY
LNFLNFLINDSIYLQDEGFNKIRKLKEMENRRKMEKEREDRIDESLSEVEDESYSEVEEE
LHSEVEEESYSDVEHDIRDYIALALDDINMLAFTSEQITAPFLLPQMVERIANMLNYFLV
QLVGPKRNSLNIENAEKYRFKPRTLLRKIISIYVHIARDDKENTLAAAICKDARSYSDKL
FTEVAKVRGLGEDGNWMELQEFANLGAKVRLVASEAMHAEAALGEIPDEFLDPIQCTLMT
DPVTLPSSNVTVERSVIERHLLSDTKDPFNRSHLTQDMLIPDVQLKSRIDEFVRSRIQHT
S
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggctaccggaaatccgaagcgatccccggaggtgatagaagatattctaatccaaaga
atcttcttagtcacgttaacgagtacggataataatcaagtgatgtatttagagaaaatg
tcggctgaaaagctccgcgaaggcaagtcacttcttttgaatcgtgatatgatggaagaa
gctcttgttggcaaactttcaggtcagtttagtggtgaatcgctgtttcaataccttaca
ggttgctatggtcgtgcttttgaagaaggtaagaagattagtaatatgaaggatgttgat
ctgcagccttctttacagaattgtgttataaaaccagctaagaaattacttgctcgttac
tgccagattgacttgtgtaacccagatatgtttccgcacagtgaaaaaatatcagcaggt
tcagccttattgcccataatctttaatgcagtttcagaaaataatacggcatgtggaaac
gagtttttgaatgggttttttacagaaactgatgattatgagattatggctccaattttt
aagaatttgtatgatagtctgaatcatgagatcagtaaagttaatgattcgccacttgga
aattttgttcaaccgttgaaggctttaaggatgttagtgggttttcccaatggtggaaaa
gcattggtaaatcacccattgtggttacccaaaggtgaagatgttaatgggcgcgtaatt
gagaaagagagtatactgggttcttttttccatattagtgctctacttgacttgacttcg
accgctgatgatattaatcttctcctttgtcctatgacattacccatgaatgctttatat
gacggactcttggaggttcttttgtacttgctgaaaagtaatgaagatgtacgagagtgt
gttatggggtatatcgggaatgtcattgagaagaactcttctagggcgcatatgcacgta
gatatggctacttctgcaagttcaggtatgttttttaatctcagtgcagtgatgctccgg
ctttgcatgccgtttttaaaagaaataacaaagagggacaagatagatgcgaaatatgtg
tctaatagtactcgtctggacttcagagcattaactgctcttcatgcatcaccagaagaa
agtggggcgtgggctgatgaaaataaattgaagtctgggaatagtcagtatagttttata
tgcgagtgtttttttatgactgctagggtccttaacctgggtttacttaaactcatatct
cagtacagagatcttgaaaaacaagtgtcggatagtataaatgaactttcgttaatgaaa
gagcagcctccttcaaaatatttcaaagaggagatagcacgtctcagtaaattaattgaa
ttgcaatctaaaataaactcgggttatgaatctcatttgttggaggattgtaatattcag
cgtgcattgtctttctaccggttgatgatcgtctggttggcagattctgttggcgggttt
aaaatgcctttgccatcaggttgccctatggagtttggttgtatgcctgagcagtttgtt
gatgatgcaatggagttgcttatatttgtctctgagattatacctgagaaattggatccc
ggcttgctaaacgattttatcaacttcattattatgttcatcggaagtccgaattatatc
agaaatccttatctcagagtcaagatgcttaaagtcttgaactgttggacgatcaagaga
aatgattcagatacagcagtttccccttttgaaggccaccaattagctcttggtcagtat
ctggttggatctgttttgaagttatatgtcgacattgagtttactggttcagatactcaa
tttttagggagattcttcatacgtgatgaaatcgcaaaatttctcaagtacttgtgggaa
gaaccaagccatctggatgcatggacgaaattcgccaaagaagaggagaagggtgtttat
ttgaacttcttaaatttcctaataaacgatagcatatatcttcaggatgaagggtttaac
aaaattcgtaaacttaaagaaatggaaaatcggaggaaaatggaaaaagagagggaagac
agaattgatgagtccctttctgaggtggaagatgagtcgtattccgaggtggaagaagag
ttgcattctgaggtggaagaagagtcctattctgatgtggaacacgacatcagggactac
atagcattagcgttggatgatatcaacatgctagcattcacttctgagcagattactgct
ccctttcttcttccccagatggttgagagaatagctaatatgctgaattatttcttggtg
caactagtcggcccgaaacggaattctcttaacattgagaatgctgaaaaatacagattc
aaaccgaggacattactaaggaagattatcagcatttacgttcatatagcgagggatgat
aaggaaaatactcttgctgctgcaatttgtaaagatgctcgatcgtatagtgataaatta
tttactgaggtagcaaaagtacgtggattaggtgaagatggaaattggatggaactgcaa
gagtttgctaaccttggtgccaaagtcagacttgtagcttcagaggcaatgcatgcagaa
gcggcactgggggagataccagatgagttcttagacccaatccagtgcacgctgatgaca
gatccagtgactcttccttcttctaatgttacagtcgaacgttcggtcatcgaaaggcat
cttcttagtgacaccaaagatccattcaaccggtcacatcttacccaggatatgctcatt
cccgatgtccaactgaaatctcgaatagatgagttcgtcaggtcacgaatccagcacacg
tcatga
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