Papaver somniferum (opium poppy): 113361690
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Entry
113361690 CDS
T05758
Name
(RefSeq) probable small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113361690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113361690
03041 Spliceosome [BR:
psom03041
]
113361690
03032 DNA replication proteins [BR:
psom03032
]
113361690
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
113361690
Spliceosome [BR:
psom03041
]
Complex A
U1 snRNP components
Sm proteins
113361690
U2 snRNP components
113361690
Complex B
U1 snRNP components
113361690
U4/U6.U5 tri-snRNP components
113361690
Complex C
U2 snRNP components
113361690
DNA replication proteins [BR:
psom03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
113361690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
113361690
NCBI-ProteinID:
XP_026460633
LinkDB
All DBs
Position
3:complement(142070585..142072149)
Genome browser
AA seq
88 aa
AA seq
DB search
MASVPVNPKPFLNNLTGKTVMVKLKWGMEYKGFLVSVDSYMNLQLANTEEYIDGQFTGNL
GEILIRCNNVLYLRGVAEDEEIEDADKD
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgtacctgtgaatccgaaacctttcttaaacaatcttactggaaagacggtc
atggtcaagctcaaatggggaatggagtacaagggttttcttgtttcagtagattcatac
atgaacttacagcttgccaatactgaagaatacattgatggacagtttactggaaatctt
ggggagattctcataaggtgcaataatgttttgtatctccgtggtgtggcggaggatgag
gaaattgaagatgctgataaagattga
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