Paenibacillus sonchi: JI735_01050
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Entry
JI735_01050 CDS
T07264
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pson
Paenibacillus sonchi
Brite
KEGG Orthology (KO) [BR:
pson00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pson03400
]
JI735_01050 (addB)
Enzymes [BR:
pson01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JI735_01050 (addB)
DNA repair and recombination proteins [BR:
pson03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JI735_01050 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QQZ61411
UniProt:
A0A974PCR2
LinkDB
All DBs
Position
complement(216962..220489)
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AA seq
1175 aa
AA seq
DB search
MTVHFLIGRSGSGKTTNIWREVNSALEREPLGPPMIVLVPEQGSFGAEQGLLKTGKSKGS
IRAQTLSFSRLAHRVKQETGGSASLPISEEGKKMLIYKIISRRKEELKLFGASSDRPGFV
ERLSQLHTELKRCCLGAADLEEQLSGMRDSTLRSPILASKLDDLHIVFSELEQEMSQLYI
DEEDRLAELAEHIKESSYIRGSEIWVDGFHGFTTQEFAVLRELMQYAAKVTVSLTLDRIY
PPGLQPHELELFHPAAVTYIKLRGMAEEMGLTVWDELLAPPVLPRFAGNPVLAHLERGFG
RRNRWTGTASAVAEAITLTAAASRRAEVEGSLREMLRLAREEGAKYGEMAVFMRNIADYE
QLVAPLFQDYGIPFFLDQKMNELHHPLVEFIRSAFDVVRRRWRYEDVFRCVKTELLLPLD
RSVTRADMDALENYVLACGIQGYRWTDGRSWKGIPSLSLEGARVVDEELLAKMEACRRVI
TGPLQAFEQRIKKSRSGLELCKAVYFLLQDMDAARKLEQLSARALELGQPEAAREHTQLW
GAVLDLLDQIAEMMGNERMEFEVFAGVLETGLAELKMGLVPPALDQVLVGNMDRTRVSGV
KYAFLLGFNEGVVPAQFKEDGILSEGERLLLENAGMELAPGSSRKLLDERFLIYNTLTTA
SRKLWISYATADEEGKALLPSEIIRQLHGMFPGALKEYFVSGFPSSAAGVSDDAETLEAL
HLSFVSQPEQTLRMLIMQLRQYRQGVEIPAFWWDVYNWFITDAEYGPKLERLLGSLFYRN
EGIRLKRETSLRLYGGTTLRGSVSRMEKFVACAFSHFASYGLRLKERQLYKLKAPDIGQL
FHAALSDMALRLQKQGRSWGSMSAEECRREAGETVDRLSPLLQGEILMSSKRYGYISRKL
KNIVGRASVILGEHARRGSFEPVGLELDFGPGKDLPPLRITLPNGCVMEVVGRIDRVDMA
EGEQGILLRVIDYKSSQKDLKLHEVYYGLSLQMLTYLDVLLTYSEQWLGQTALPAGTLYF
HVHDPLLTSANGMNREQAEQELMKRFKMKGLLTADREVVSLMDTTLDKGYSSIVPVALKS
DGSFYSSASVATPEQWGHLLSSVRSTISDIGTRITEGDVAIQPYRIQQETACTFCSFRPV
CQFDEAVEGNAYNNLGKPGKEVIWDLLSREGGEKP
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgacggtacactttttgattggccgctcaggcagcggaaagactacgaatatatggagg
gaagtaaactccgctctggagcgggagccgctgggccccccgatgatagtgcttgttccg
gagcagggctcctttggtgcggagcaagggctgctgaagacgggcaagagtaagggcagc
atccgtgcccagaccctgagcttctcgcggctggcccaccgggtgaagcaggagaccggc
ggcagcgccagcctgccgatcagcgaggaaggcaagaagatgctgatctacaagattatc
agccgccgcaaggaagagctgaagctgttcggggcatcaagcgacagaccgggttttgtg
gaacggcttagccagctgcatacggagctgaagcgctgctgcctcggcgcagctgatctg
gaggaacagttgtcggggatgcgagattccacgctgcggagtcctattcttgccagcaag
ctggatgatttacatatcgtgttcagcgagctggaacaggaaatgtcccagctgtatatc
gatgaagaggaccgcctcgccgagctggctgagcatattaaggaatcctcatatattcgt
ggttcggaaatctgggtcgacggctttcacgggttcaccacacaggaatttgctgtgctg
cgggagctgatgcagtatgccgccaaggttacggtctcattgacactggaccggatttat
cctccgggattgcagccgcatgaattggagctgttccatcctgccgcagtaacctacatc
aagctgcgtggaatggctgaggaaatggggctgacggtatgggacgagctgctggcgccg
ccggtgctgccgcgttttgccgggaatcctgtccttgcccatttggagcggggatttgga
cgccggaaccgctggaccggtacagcttctgccgttgcagaggccattacccttacagcg
gccgcttcgcgcagagccgaggtggaaggaagcctgcgggaaatgctccggctggcccgt
gaggaaggggccaaatacggggagatggctgtattcatgcgcaatattgccgattatgag
cagcttgtggcccccctgttccaggattacgggattccgttcttccttgaccaaaaaatg
aatgagctgcatcatccgctggtggaatttatccgctctgcctttgatgtggtgcggcgc
cggtggcggtatgaggatgtgttccgctgtgtgaagacagagctgctgctgccattggac
cgcagtgtgacccgtgcggatatggatgcgctggagaattacgtgctggcctgcggcatt
cagggctaccgctggacggatggccggtcctggaaaggaattccgagcctttcgctggag
ggtgcccgagttgtggatgaagagctgctggcgaaaatggaggcatgccgtagggttatt
acgggtccgctgcaggcttttgaacagcggatcaaaaaaagccgcagcggtctggagctg
tgcaaagcggtatattttttattgcaggatatggatgccgcccgcaagctggaacagttg
agtgcccgggctttggagcttggacagcctgaggcagcccgggagcacacgcagctgtgg
ggtgcggtgctggaccttctggatcagattgcggagatgatgggcaatgaaagaatggag
tttgaagttttcgccggggtgctggagacaggtctggctgaactgaagatggggcttgtg
cctcccgcactggatcaggtgctggtagggaatatggaccgcacccgggtatcgggtgtc
aaatatgcctttttgctgggatttaatgaaggtgttgttcctgcccagttcaaggaagac
ggcattctctcggaaggggagcgtctgctgctggagaatgcgggaatggagcttgctccc
ggctcttcccgcaagctgctcgatgagcgctttctgatctacaatacactcactacggcg
agccgcaagctctggatcagttacgcgacagcggatgaagagggcaaggcgctgctgcca
tcggaaattatccgccaattgcacggcatgtttcctggagcactgaaagagtatttcgtt
tccggatttccatcgtctgcagctggagtttcagacgatgcagagactctagaagcgctg
catctgagctttgtcagccagccggaacagacgctgcgaatgctcattatgcagcttcgg
cagtatcgccagggggtggaaattcccgcattttggtgggatgtctataactggtttatc
accgatgcggagtatggaccgaagctggaacggctgctcggctccctgttctaccgcaat
gaaggaatccggttgaagcgggagaccagtctgcgcctgtacggcgggacaacgctacgc
ggaagtgtgtcacgcatggagaagttcgtggcctgcgccttctcgcatttcgcttcgtac
ggactgagactgaaggaacgccagctgtataagctgaaggcaccggacattggacaactg
ttccatgccgctctcagcgatatggctctgcggctgcagaagcagggacggagctgggga
agcatgtctgcggaggaatgccgccgtgaagccggcgagaccgtggaccggctctctccg
ctcctgcagggcgaaattctaatgagcagcaaacgctacggatacatctcccgcaagctc
aaaaacattgtcggccgcgcctcagtcatcctcggtgaacacgccaggaggggcagcttt
gagccggtggggctggaactggactttggcccgggcaaggatctcccgccgctgaggatt
acactgccgaacggctgtgtgatggaggtagtgggccggatcgaccgtgtggatatggct
gaaggcgaacagggcatcctgctgcgggtcatcgactacaaatcaagccagaaggatctc
aaactgcatgaggtctattacggactgtccctgcaaatgctgacctacctcgatgttctg
cttacgtattcggagcagtggctcggccaaaccgccctgccggccggaacgctctatttc
catgtgcatgatccgctgctgacttcagcgaacggcatgaaccgcgagcaggcagagcag
gagctgatgaaacggttcaagatgaaggggctgctgacggcggaccgtgaagtggtctcc
ctgatggataccactctggataaggggtattcctcaatcgtgccggtggcgctgaagagc
gacgggagcttttacagcagtgcttcggtagccactcccgagcaatgggggcatttgctg
tcctcagtgcgcagcaccatctctgatatcgggacacgcattactgaaggggatgtagcg
atccagccttaccggatacagcaggaaacagcttgcaccttctgctctttccggccggta
tgccaattcgatgaggccgtggaaggcaatgcctacaacaatctcggcaagccgggcaag
gaagtcatctgggacctgctgtcccgcgaaggaggagagaagccatga
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integrated database retrieval system
