Paenibacillus sonchi: JI735_01220
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Entry
JI735_01220 CDS
T07264
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pson
Paenibacillus sonchi
Pathway
pson03030
DNA replication
pson03430
Mismatch repair
pson03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pson00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JI735_01220 (holA)
03430 Mismatch repair
JI735_01220 (holA)
03440 Homologous recombination
JI735_01220 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pson03032
]
JI735_01220 (holA)
03400 DNA repair and recombination proteins [BR:
pson03400
]
JI735_01220 (holA)
Enzymes [BR:
pson01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JI735_01220 (holA)
DNA replication proteins [BR:
pson03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JI735_01220 (holA)
DNA repair and recombination proteins [BR:
pson03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JI735_01220 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
QQZ61442
UniProt:
A0A974PCG0
LinkDB
All DBs
Position
complement(261020..262039)
Genome browser
AA seq
339 aa
AA seq
DB search
MDAKAAAKDIRQGKISPLYVLYGSEKFRMNEFAAFLEEHLIAKEDRDFAVIPFDLSETPV
QAVVEEAETVPFMVERKLLLVRDASLFTAGKDNAKIEHRVEVLSDYMQHPAEFSVIVFMV
NSDKLDERKKIVKTVKTAGTVLAFNPLGAEELLRWVEKGVRDRGCEPAQGAAAVLVANAG
TGLQGLSAEMDKLCLFAGKGGIVDAAAIESLVHRGTEQNVFTLVEDIANLRLDKALNTLY
ELLKQREEPIKIAALIARQFRIILQVKDLSAQSYSQGQIASQLGLHPYAVKLAGEQARKF
ESQRLRQILSFLADLDYQMKTGAIDKVLGLEMFMLRLGA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggatgccaaagcggcggccaaagacatcagacaagggaaaatttcgccgctctatgtg
ctgtacgggagcgagaagttccggatgaatgaatttgcagcctttctggaggagcacctg
attgccaaagaggaccgggattttgctgtcatcccctttgatctttccgagacgccggtg
caggcggtcgtggaggaagcggagactgtgccgttcatggtggagcggaagctgctgctg
gtgcgtgatgcctctctgttcaccgcaggaaaggacaatgccaagatagaacaccgggtg
gaggttctcagcgattatatgcagcatccggcggagtttagcgtgatcgtcttcatggtc
aacagtgacaagctggatgagcgcaaaaaaattgtcaagacggtcaaaaccgcaggaacg
gtgctggcttttaatccgctgggagcagaggagctgctgcgctgggtcgaaaagggcgtg
cgtgaccgcggctgcgagccggcacagggagccgctgcggttcttgtagcgaacgccgga
accggactgcaggggctgtcggcagagatggacaagctgtgcctgttcgccggcaagggc
ggaattgtggatgccgcagccatagagagcctggtgcaccgcgggacggagcagaatgtg
ttcacactggtggaggatatcgctaatctgcgcctcgacaaggcgctcaatacgctctat
gagctgctgaagcagcgggaggagccgatcaagattgccgcgctgattgccaggcagttc
cggattattttgcaggtcaaggatttgtctgcccagagctactcgcaaggccagatcgct
tcacagctggggctgcatccgtacgccgtcaagctggcgggggagcaggcccgcaagttc
gagagccagcgcctgcggcagatcctcagcttcctggccgatctggattaccagatgaag
accggggccatcgacaaggtgctgggcctggagatgttcatgctgcgtttgggtgcctag
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