KEGG   Paenibacillus sonchi: JI735_04355
Entry
JI735_04355       CDS       T07264                                 
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
  KO
K03090  RNA polymerase sigma-B factor
Organism
pson  Paenibacillus sonchi
Brite
KEGG Orthology (KO) [BR:pson00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pson03021]
    JI735_04355
Transcription machinery [BR:pson03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     JI735_04355
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r3 Sigma70_r2 Sigma70_r4_2 HTH_23 GerE HTH_50 Sigma70_ECF HTH_38 HTH_28 DUF1492 HTH_Tnp_ISL3 Cyclophil_like2 KORA TnsD HTH_24 MarR HTH_29 HTH_31 MarR_2 HTH_10 Phage_antitermQ DUF7343
Other DBs
NCBI-ProteinID: QQZ61939
UniProt: A0A974PDD7
LinkDB
Position
complement(948912..949682)
AA seq 256 aa
MNEKVTPPESMNEAVSLIWEYQQTKDNEIATALIRKYEPMVKMAAGKIARNRPDLYEDLY
QVGQMALIRLLQQYDISLGIPFEPYAMKSMIGHMKNFLRDKSWYIQVPRRIKEKGALVQQ
AIDELTIRLERSPAVEEIAHYLDLTVEETVEVLAGRECYHYVSLDSPLSQEETGATLGEL
ISSEADDYETVEKRMDLQQALGQLKEQEQQVLLLAFQDGQSQRAIAQKLGVSQMSVSRIQ
KRATEKLKQIMANSSY
NT seq 771 nt   +upstreamnt  +downstreamnt
atgaacgaaaaagtgactccccctgagtccatgaacgaagcggtaagtctgatctgggaa
taccagcagaccaaagataatgaaattgcaacagctttgatccggaaatatgaaccgatg
gtgaagatggctgccgggaagattgcccgcaaccgtcctgacctttatgaagatctgtat
caggtaggccaaatggcgctgattagactgctgcagcaatatgacatcagcctgggaatt
ccgtttgagccttatgctatgaaaagcatgatcgggcatatgaaaaattttctgcgcgac
aaatcctggtacatacaggttcctagaaggatcaaagagaagggtgcccttgttcagcag
gccattgatgagctaaccatcagattggaacgttctcctgcagttgaggaaattgcccat
tatcttgatcttaccgtagaagaaacagtcgaagtcctggccggaagagagtgttaccat
tacgtatccctggattccccactttctcaagaggagacaggtgctacgcttggggaactc
atcagctctgaagccgatgattatgagaccgtggagaagcgaatggacctgcagcaggct
ctgggacaactgaaagaacaggagcagcaggtgctgctgctggctttccaggatggccag
tcacagcgtgccattgcccagaagcttggagtgtcgcaaatgagcgtatcgcggattcaa
aaacgggctacagaaaagctgaagcagatcatggcgaattcatcctattga

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