Paenibacillus sonchi: JI735_06775
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Entry
JI735_06775 CDS
T07264
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pson
Paenibacillus sonchi
Pathway
pson03022
Basal transcription factors
pson03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pson00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
JI735_06775
09124 Replication and repair
03420 Nucleotide excision repair
JI735_06775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pson03021
]
JI735_06775
03036 Chromosome and associated proteins [BR:
pson03036
]
JI735_06775
03400 DNA repair and recombination proteins [BR:
pson03400
]
JI735_06775
Enzymes [BR:
pson01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
JI735_06775
Transcription machinery [BR:
pson03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
JI735_06775
Chromosome and associated proteins [BR:
pson03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
JI735_06775
DNA repair and recombination proteins [BR:
pson03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
JI735_06775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
QQZ62310
UniProt:
A0A974PEF8
LinkDB
All DBs
Position
complement(1470630..1472939)
Genome browser
AA seq
769 aa
AA seq
DB search
MDNAEIFLSVRTLVEYAFSSGSLEPGFRSGAAMAEGTRIHQHIQKQYKEGDRKEVYLKAE
MPYEGLLFIIDGRCDGLLAGEDGRLIVEEIKSIAGPLDSTMEGKEVHWAQALMYAYMIVI
DQELPSIEVKLTYVLRGSDEQHSLYRTAGREELEAFASETVARYAPFAKLKVRHKARREE
SIRSLDFPFRDYRQGQRHFAAAVYKTTVEGVNLFAQAPTGIGKTMSTLFPAVKALGEGVV
AGIFYLTAKTVTRYAAQEAVLLLLAGGLHLHAITLTAKEKACFREEGLCGKEGCPYAEGY
YDRVNAAVLDMLEHETLMTQEIIAVYARRHEVCPFEFSLDAAYACDMVICDYNYIYDPRI
SLKRLPEERKKKTVLLVDEAHNLVDRGREMFSASLTKAPFLNLQRQYKTVNRKLGAAAKA
VNAFFIALRKSCNEDGEGHWAEYPGELPQLLEAFAAEAELELSSPSSALITLAGDGEDGL
LDTYYAVQGMLRTIKTYDERYVTYAEVRRGDVFLKLFNLDPSHLLQQMAKGFRSQILFSA
TLSPMSYYRDMIGAAEEDYSLRVASPFHKEQWEVSVLPVSTRYRDRADSLIPLSDALRGM
VARKGNYLVFFPSYAYLQSVFEVFTDKYPEITTLVQGSGMGEQAREEFLASFRPDNPQTL
LGFAVLGGIFSEGVDLPGDRLNGVMIVGVGLPQVGLERNLLRGYFGSQGKNGFDYAYVYP
GMCKVQQAGGRLIRSESDSGIIVLADDRFLQQPYAGLLPEEWRDYLIRT
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggacaatgcagagatatttctttcggtaagaacgctggtggagtatgccttcagcagc
ggcagtctggagccggggttccggagcggggcggcgatggcggaaggcacgcgtattcat
cagcatatccagaagcaatataaagaaggggaccgcaaggaggtctacctcaaggcagaa
atgccgtatgagggacttctctttatcatcgacggacgctgtgacggtttgctggccgga
gaggatggcaggctgattgtagaggaaatcaagtccatagccgggcccctggattccacg
atggaagggaaagaggtccattgggcgcaggcgcttatgtatgcctatatgatcgtaatc
gatcaggagcttccttctattgaagttaagctgacgtatgtgctgaggggcagtgatgag
cagcacagcctgtacaggacagccgggcgggaggagcttgaggcctttgcctccgaaacg
gtggcccggtatgcgccctttgcgaagttgaaggtacgtcataaggcccggagggaagag
agtatccggagtctggactttccgttccgggattaccggcagggccagcggcattttgcc
gctgctgtgtacaaaacaacggttgaaggtgttaatctgttcgcccaagcccctacaggc
atcggcaaaacaatgtcgaccctgttcccggcggtaaaagcactgggcgaaggggtagtc
gcagggatcttctatttgaccgccaagacagttacccggtatgcggcgcaggaagcggtt
ctgctgctgcttgcaggcgggcttcatctccatgccatcacgctgacggctaaggagaag
gcctgcttccgtgaggaggggctctgcggcaaggagggctgcccttacgccgagggctat
tatgaccgggtgaatgctgctgtgctggacatgctggagcatgaaacattgatgacgcag
gagattatcgccgtctatgcccggcggcatgaggtgtgtccatttgaattctcgctggac
gccgcctatgcctgcgacatggtcatttgtgattacaactatatctatgacccccggatc
agtctgaaacggctgccggaggaacgcaaaaagaagacggtgctgctggtggatgaggcc
cataacctggtggaccggggcagggaaatgttctctgcctcgctgaccaaggcgccgttc
ctgaacctgcagcggcagtataagacggttaaccgcaagcttggcgccgcggccaaagcg
gtgaatgcttttttcatcgcgttgcgcaaaagctgtaatgaggacggtgaaggacattgg
gctgaatatcccggggaattgccgcagctgctggaggcttttgccgccgaagcggaactg
gagctgtcaagtccgtcctccgctctcattactctggccggggatggggaagacggcctg
ctggatacctattatgcggtccagggtatgctgcgcaccatcaaaacctatgatgaacgg
tatgtcacctacgcagaggtacggcgcggcgatgtgttcctgaagctgttcaatctggac
ccctcgcatctgctgcagcagatggccaaaggcttccgcagccagattctcttctcagcg
actctctcgccgatgtcctattaccgggacatgattggtgcagcagaagaggattacagc
ctgcgtgtagcttctccgttccacaaagagcagtgggaggtgtccgtgcttccggtatcc
acccgttatcgtgaccgtgccgattccctgatccccttgagcgacgcgctgcgcgggatg
gttgcaaggaaagggaattatcttgtgtttttcccttcctacgcttatttgcagagtgtc
ttcgaggtattcacggacaagtatccggagatcacaaccctggtgcagggcagcggaatg
ggtgagcaggcgcgggaggagttcctcgcttccttccgtccggacaatccgcagacgctg
cttggcttcgcggtgcttggcgggattttttcggagggggttgatttgcccggggaccgc
ttgaatggtgtgatgattgttggtgtcggtctgccgcaggtgggattggagcgcaatctg
ctgcgcggatattttgggtcccagggcaagaacggctttgattatgcctatgtctatccg
ggcatgtgcaaagtgcagcaggcgggcggaaggctgatccgcagtgagagtgacagcgga
atcattgtgctggccgatgaccgttttttacagcagccttatgcgggcctgctccctgag
gaatggcgggactaccttatccggacctaa
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