Paenibacillus sonchi: JI735_09255
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Entry
JI735_09255 CDS
T07264
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pson
Paenibacillus sonchi
Pathway
pson03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pson00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JI735_09255 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pson03021
]
JI735_09255 (rho)
03019 Messenger RNA biogenesis [BR:
pson03019
]
JI735_09255 (rho)
Transcription machinery [BR:
pson03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
JI735_09255 (rho)
Messenger RNA biogenesis [BR:
pson03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JI735_09255 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
ATPase_2
AAA
AAA_22
OB_RNB
S1CSD-TOTE-2
Spore_III_AA
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QQZ62718
UniProt:
A0A974PG24
LinkDB
All DBs
Position
1998091..1999449
Genome browser
AA seq
452 aa
AA seq
DB search
MDLQISDLEEMKLTDLYKLAKKYQIPYYGTLKKRELIFAILRAQAEQSGLMFMEGVLEIL
PEGYGFLRPINYLPSAEDIYISASQIRKFDLRSGDLVSGKCRTPKENERYFGLLQVNAVN
GENPASAAERLHFPALTPLYPQDKLPLETSPTHLSTRIMDLLAPVGLGQRGLIVAPPKAG
KTLLLKEIANSISTNNPEIALFVLLIDERPEEVTDMQRSVKGEVVASTFDELPENHIKVA
ELVLQRALRLVEHKKDVVILLDSITRLARAYNLVVPPSGRTLSGGIDPAAFHRPKRFFGS
ARNVEEGGSLTILATALIDTGSRMDDIIYEEFKGTGNMELHLDRKLAERRIFPAIDIRRS
GTRREEVLLSKEELDTIWAIRKNMNESYDFVEGFLKKLRDSKTNAEFLASFDVAGNKESS
SPSGTASNGGTSNSGSSARRTSRPKTPSVPTT
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggatcttcaaatttccgatttggaagaaatgaagctgaccgatttgtataagctggcg
aaaaaataccagattccatactacgggacgctaaaaaaacgggagctgatttttgccatc
ctccgggctcaggcggaacagagcgggctcatgtttatggaaggtgtgctcgaaattttg
cctgagggctatggttttctaaggccgattaactacttgcccagcgcggaagatatttat
atctcggcttcccagattcgcaagttcgatcttagaagcggcgatctggtatccggcaaa
tgccgcactcccaaagagaatgaacgctacttcggattgcttcaagtcaacgccgtcaac
ggcgagaatcctgccagtgcagcagagcgtttgcattttccggcgctgacacctctttat
ccgcaagataagctgccgcttgaaacatcccctacacacttgtctacccgaattatggat
ttgcttgctcctgttggtctggggcagcgcggtttgattgtagcacctcccaaagcaggg
aaaacgctcctcctaaaagaaattgccaacagcatttccactaacaatcctgaaattgct
ctgtttgtactgctgattgatgaacgtcccgaggaagtaacggatatgcagcgttctgtg
aagggtgaagttgtggcatctacctttgatgagctcccggagaaccatatcaaagtagcc
gagcttgtactgcagcgggctttgcgtttagtagagcataagaaggatgttgtcattttg
ctggatagtattacccggctcgcgcgtgcctacaacttggttgtacctccatccgggcgc
acactgagcggcggtattgatccggcggcattccatcgtcccaaacggttttttgggtct
gcacggaatgtggaggaaggcggaagcctaaccatactcgcaacggcgcttattgatacc
ggttcacggatggatgatattatttatgaagaatttaaaggtacagggaacatggagctt
catttggaccgcaagctggcagaacgccgcattttcccggccatcgatatccgccgttcc
ggcacgcgccgcgaagaggtgctgctgagcaaggaagagctggataccatttgggcaatt
cgcaaaaatatgaacgagtcctacgattttgtggaaggcttcctcaaaaagctgcgtgac
agcaagacgaatgccgaattcctggcctcctttgatgttgcggggaataaggaatcttcg
tctccaagcggaacggcaagcaatggcggaacctcgaacagcggctcgtccgcacgccgg
acatcccggccgaagacgccttcagtgcccaccacctga
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