Paenibacillus sonchi: JI735_14645
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Entry
JI735_14645 CDS
T07264
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K23774
DeoR family transcriptional regulator, catabolite repression regulator
Organism
pson
Paenibacillus sonchi
Brite
KEGG Orthology (KO) [BR:
pson00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pson03000
]
JI735_14645
Transcription factors [BR:
pson03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
JI735_14645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBS
HTH_11
HTH_DeoR
HTH_5
PH0730-like_N
HrcA_DNA-bdg
HTH_24
MarR_2
Sigma70_r4
MarR
HTH_Mga
HTH_20
HTH_IclR
HTH_PafC
HTH_AsnC-type
Penicillinase_R
Fe_dep_repress
Dimerisation
HTH_36
GerE
HTH_9
Cep192_D3
TrmB
HTH_23
HTH_17
LexA_DNA_bind
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QQZ63576
UniProt:
A0A974PHG3
LinkDB
All DBs
Position
complement(3224548..3225192)
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AA seq
214 aa
AA seq
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MIELTPRQLQIVEIVKKRAPITAEQIAEHLNLSKPTIRSDLSVLVMLEYIDAKPKVGYFP
GKKTAERLGGSYLLKETKVKDIQSIPIIIRETTTIQDAVVTLFLQDVGTLIICDGDGKLT
GVASRKDFLKVTLGNPGAVSMPVSMVMTRQPKVVTVSPGDTVLDAAQKMIFHEVDSLPVV
IPGTVEENGPRLDVVGRLTKTSIVKLLLDLEAKG
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaactgacaccccgtcaactgcaaattgttgaaattgttaagaaaagagcaccc
attaccgccgagcaaattgcggagcatctcaatctcagcaagccgacgatccgctcggac
ttatccgtgcttgtcatgctggagtacattgacgccaaacccaaggtgggttattttccc
ggcaaaaaaaccgcagagcgcctcggcggcagctatctgctgaaggaaaccaaggtcaag
gacattcagagcattccgatcattatccgcgagacgacaacgattcaggatgccgtagtt
acactgtttctgcaggatgtcggcacgctgatcatctgcgacggggacggcaagctgacc
ggagtggcctcgcgcaaggattttttgaaggttacgctgggcaatcccggtgcggtatcc
atgcctgtaagcatggtgatgacccgccagcccaaggtcgtgacggtttctcccggagat
acggtgcttgatgccgcacaaaaaatgatttttcacgaggtggacagtttgccggtggta
atccccggtactgtggaagaaaacggcccaaggctcgacgtggtcggacggctgaccaaa
acttccatcgtcaaactactcctcgatctagaagccaaaggataa
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