Paenibacillus sonchi: JI735_15930
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Entry
JI735_15930 CDS
T07264
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pson
Paenibacillus sonchi
Pathway
pson03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pson00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JI735_15930 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pson03019
]
JI735_15930 (recQ)
03400 DNA repair and recombination proteins [BR:
pson03400
]
JI735_15930 (recQ)
Enzymes [BR:
pson01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JI735_15930 (recQ)
Messenger RNA biogenesis [BR:
pson03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JI735_15930 (recQ)
DNA repair and recombination proteins [BR:
pson03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JI735_15930 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
Helicase_Sgs1
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QQZ63785
UniProt:
A0A974PHB9
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All DBs
Position
3498016..3499851
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AA seq
611 aa
AA seq
DB search
MKMQAPTMEQAQAELQKYYGYPDFREGQKKIVMNLLEGRDTLGIMPTGGGKSICYQVPAL
LLPGLTLVISPLISLMKDQVDALTTAGIPAAYINSTLSGKEVNERIRAARRGELKLLYVA
PERLELDWFRLEMAGLSISCVAVDEAHCVSQWGHDFRTSYLAVSPFVDELPERPILAAFT
ATATPEVMEDMVRLLRLRQPGVFMTGLGRDNLAMSVLRGENKREFVLDYTAQHSHQPGIV
YAATRKEVDDLYQRLQASGIAAGRYHAGMSDQERAESQEGFLYDDIRVMVATNAFGMGID
KSNVRYVIHYNMPKNMEAYVQEAGRAGRDGEPSQCILLFSAQDIMTQKFLIEQNPQDADR
KANEYRKLQQMIDYCYTTRCLRSAQLDYFGEEHGDQPCGICSSCTDERELVDMTVDAQKI
FSCIHRMRERFGVALVSSVLKGSRNQKVLQYGFENLPTHGAMSSRTEKEITESINVLISE
GYLSLSEGQYPVVRLQPLAAEVLRGQRQVLQRVARVRSTGGSSGGRDRSRVRDLSPSAVN
ETVFEQLRLIRRELAGREHVPSYIIFNDATLREMSVVCPQTEAEMLRVKGVGEVKYRKYG
KPFLEFFQNEM
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgcaagcacctaccatggaacaggcgcaggctgaactgcaaaaatattatggc
tatcccgacttccgggagggccagaaaaaaattgtcatgaatttgctggagggccgcgat
acgctcggaatcatgccgacgggcggcgggaaatcgatatgttatcaagttccggcattg
ctgctgccgggacttacgctggtcatttccccgctgatttcactgatgaaggatcaggtg
gacgcgctgaccacggccggaattccggctgcatatatcaacagcacgctgagcggcaaa
gaagtgaatgaacgcatccgtgcggcgcgccggggagagctgaagctgctctatgtggcg
cccgagcggctggagctggactggttccgcctggaaatggccggcttgtccatctcctgt
gtcgcggtggatgaagcccactgtgtctcccagtgggggcatgatttccggacgagctat
ctggcggtttccccttttgtggacgagctgccggaacggccgattcttgccgcctttacc
gccacagctacgcctgaggttatggaggatatggtccggctgctgcggcttcgccagccg
ggcgtattcatgaccggactgggccgggataatctggccatgtcggtgctgcgcggggag
aataaacgcgagttcgtgctggactatacggcgcagcattcccatcagccgggcattgtc
tatgccgccacccgcaaagaggtggatgatctgtatcagcggctgcaggcttccggcatc
gcagccggacgttatcatgcagggatgagcgaccaggagcgtgcggagagccaggaaggt
tttctctatgacgatatccgcgtcatggttgccaccaatgcttttgggatggggatcgac
aagtcgaatgtccgttacgtcatccattacaatatgcccaaaaatatggaagcctacgta
caggaagcgggccgtgccgggcgggacggagagcccagccagtgtatcctgctcttcagc
gcgcaggatattatgacgcagaagttcctgatcgagcagaatccgcaggacgcggaccgc
aaggctaatgaataccgcaagcttcagcagatgatcgattactgctatacgacccgctgt
ctgcgcagcgcccagctggattattttggcgaggagcacggggaccagccatgcgggatc
tgcagctcgtgtacagatgaacgcgagctggtggatatgacggtggatgcccagaagata
ttctcctgcatccaccgtatgcgtgaacgctttggcgtcgcactggtatcctctgtcctc
aaaggctcgcgcaaccagaaggtgctgcagtacggcttcgagaatctgcctacccacggg
gcgatgtccagccgcaccgagaaggagattaccgagagcatcaatgtgctgatctcggaa
gggtatctgtccttatcggaaggccagtatcctgtggtgcggcttcagccgctggccgcc
gaagtgctgcgcggccagcggcaggtcctgcagcgggtggcccgggtgcgcagcaccgga
ggcagctccggcgggcgggaccgcagccgcgtgcgcgatctgtcgccgtcggcggtgaat
gagacggtgttcgagcagctgcgcctgatccgccgcgagctggcggggcgcgagcatgtg
ccgtcctacattattttcaatgatgcgaccctgcgcgagatgagcgtggtttgcccgcag
actgaagcggaaatgctgagagtcaaaggggtcggtgaagtgaaataccgtaaatacggc
aagccgttcctggaattttttcaaaatgaaatgtaa
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