Paenibacillus sonchi: JI735_16340
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Entry
JI735_16340 CDS
T07264
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pson
Paenibacillus sonchi
Pathway
pson03030
DNA replication
pson03430
Mismatch repair
pson03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pson00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JI735_16340
03430 Mismatch repair
JI735_16340
03440 Homologous recombination
JI735_16340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pson03032
]
JI735_16340
03400 DNA repair and recombination proteins [BR:
pson03400
]
JI735_16340
Enzymes [BR:
pson01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JI735_16340
DNA replication proteins [BR:
pson03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JI735_16340
DNA repair and recombination proteins [BR:
pson03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JI735_16340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QQZ63854
UniProt:
A0A974PH65
LinkDB
All DBs
Position
complement(3592948..3593637)
Genome browser
AA seq
229 aa
AA seq
DB search
MNFTAIDFETANSSRSSACALGLVQVREGVVSAEHVWLIDPQQRFDGMNIAIHGITPSMV
EGKPTFGELWPTLEPLLQGEVVIAHNAAFDMSVLRYCLDRTAYSYPEFQYMCTYLLGKKM
LQDLPSHKLNVVSQHFGISLKHHDALDDARAAAAILLKLMEREQHTDPLLLAGSQGYKAG
TMYAGGYTPFKSPPKKPAKKAAAKKSTLPPSSRPAKSTSGSSSALGNFF
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaattttactgcgatagactttgaaacggccaactccagccgctcaagcgcctgcgct
ttggggcttgttcaagtgagagagggtgtagtgagcgccgagcatgtgtggctgattgat
ccgcagcagcggttcgatggcatgaatattgccattcatggtattaccccctccatggtt
gagggaaaaccgacgtttggtgagctatggcccacactggaaccgctgctgcaaggagag
gtggtcatcgcgcataatgctgcttttgatatgagtgtgctgcgctattgcctggaccgg
accgcctacagctatcctgagtttcagtacatgtgtacctacctgctcggcaaaaaaatg
ctgcaggacctgccttcccacaaactgaacgtagtgtcacagcatttcgggatcagcctg
aagcatcacgatgcgctcgatgacgccagagctgcggcggcgatactgctgaagctgatg
gaacgtgagcagcataccgatcccctcttgctggccggcagccagggctataaggccgga
acgatgtatgcgggaggctatacgccttttaagtccccgcccaagaaaccagccaaaaaa
gcagcagccaagaaaagcactctaccgccatcctcccgcccggcaaaaagcacctccggc
agcagctccgccttgggcaatttcttctga
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