KEGG   Paenibacillus sonchi: JI735_25475
Entry
JI735_25475       CDS       T07264                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pson  Paenibacillus sonchi
Brite
KEGG Orthology (KO) [BR:pson00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pson03400]
    JI735_25475
Enzymes [BR:pson01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     JI735_25475
    5.6.2.6  RNA 3'-5' helicase
     JI735_25475
DNA repair and recombination proteins [BR:pson03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    JI735_25475
SSDB
Motif
Pfam: DEAD Helicase_C ResIII WHD_Lhr UvrC_RNaseH Cas3-like_C_2 DUF3907
Other DBs
NCBI-ProteinID: QQZ59903
UniProt: A0A974PAM1
LinkDB
Position
complement(5715962..5718160)
AA seq 732 aa
MSSNPFYRLAPFIKEFIYKNRWETLREAQVDACRVLFDTPHHLLIASGTASGKTEAAFFP
ALTQLYEDPSASVGILYIAPLKALINDQFTRLNDLLREGNIPVWHWHGDVPQADKTKLMQ
NPSGVLQITPESLEGLLMNRPNAIPALFHDLRFIIVDEVHAFMGADRGIQVLSQLARISR
MAGCHPRRIGLSATLSDYASVTEWLAAGTRESVEVSAPQGGRKLRLSVEHFSFPDARDEV
QAEHLERARQAYYGFIYDHTHLKKALIFTNSRTDAEEAILEMRRLAAKRGERDVFHVHHG
SISAMLREETEAALRQGPGPAVAAATLTLELGIDLGELERVLQLGAPYSCASFVQRLGRS
GRRGDAASEMIFVTPEEEDEEAQLPARMPWTLLRAIAVIELYVREKWVEPLAVRQLPVGL
LYHQTMSILKSMGEAEPEDLKAAVLSLPSFSSIEPGDYDAFMEYMIGMGHIESMDEGSLL
VGLAGEKIVNNFRFYAVFKDDEEHVVYNGTEEIGSITTVPPPGYCFTLAGKLWKVEEVDN
RHKAVYVKGSRGKVDTLWLGAGGDVHTRIMNKIREVLGATALYPYLAPSAAARLERARRL
AKESGLLEHSVLPAGGDSMFILPWAGSRQFRTLERLLKNNLKGPLGLRSVTPMEPYYMVV
SGKTDAETLEQEIIAEAAAVSDPIALLGPDEAPYLGKYDEFIPHDLLRKAFSLDGLDVPG
LVEVLKQWVRVD
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgagcagcaatccgttttacaggctggcaccgtttatcaaagagtttatctataagaac
cgctgggagacgctgcgcgaagcccaggtggatgcctgccgggtgctgttcgatacgccg
catcatctgctcattgcttccggtacggcatccggcaagacagaagctgctttctttccg
gcgcttacccagctgtacgaagatccgtccgcctcagtgggcatcctctacattgcaccg
cttaaggcgttgatcaacgaccagtttacccggttgaatgacctgctgcgcgaagggaac
attccagtctggcattggcatggagatgtgccgcaggccgacaagacaaagctgatgcag
aacccctccggcgtgctgcagattaccccggaatcgctggaagggctgctgatgaaccgc
cccaatgctattccggcgctgttccatgatcttcgcttcattatagtggatgaagtgcat
gccttcatgggagcggaccgcggcattcaggtgcttagccagctggcgcggatctcgcgt
atggccggctgccatccgcgtcggatcggactgtcagccacgctgagcgactacgcttcc
gtgacggaatggctggccgccggcacccgcgagagcgtggaagtctccgcaccgcagggc
gggcgcaagctgcgcctcagcgtggagcacttttctttcccggatgcacgggacgaagtg
caggccgagcatctggagcgggcgcggcaggcgtattatggcttcatctatgaccatacg
catctgaagaaggcgctcattttcaccaacagccgcacggatgccgaggaggcaattctg
gagatgcggcggcttgctgcgaagcgcggggagcgcgacgtgttccatgtccatcacggc
agcatctccgcgatgctgcgtgaagagacggaggctgcgctccgtcagggacccggaccg
gcggtggccgcggccacgctgacgctggagctgggcattgacctgggcgagctggagcgc
gtgctgcagctcggtgcgccttacagctgcgcgagcttcgtgcagcggctggggcgctcc
gggcggcggggcgacgccgcttcagagatgatcttcgtcacgccggaggaagaggacgaa
gaagcccagcttcccgcgcggatgccgtggacgctgctgcgggctatcgccgtcatcgag
ctctacgtgcgcgagaagtgggtcgagccgctggctgtgcgccagcttccggtggggctg
ctctaccatcagacgatgagcatcctgaagagtatgggcgaagcggagccggaggatctg
aaggcggccgtgctgagcctcccgtcgttcagcagcatcgagccgggcgattatgatgcg
ttcatggaatatatgatcggcatgggccatattgagtccatggatgaaggcagcctgctg
gttgggctggcaggggagaagatcgtcaataacttccgtttctatgcggtcttcaaagac
gacgaggaacatgtggtatataatggcaccgaagagattggttcaataaccactgtcccg
ccgccggggtactgcttcactcttgcaggcaagctgtggaaggtcgaagaggtggataac
cgccataaagccgtatatgtcaaaggctcgcgcggcaaagtagataccttatggctgggc
gcaggcggggatgtgcatacccgtattatgaacaaaattcgtgaggtgctgggagctacg
gcactatatccctatctggcgcccagcgcggcagcaaggctggaacgtgcccgccgtctg
gcgaaggagagcggactgctcgagcattcggtgcttccggccggaggcgattcaatgttc
attctgccctgggccgggagccggcagttccggacgctggaacggctgctgaagaataat
ctcaaaggcccgctgggcctgcgttctgtaacccccatggagccttattatatggtcgtt
tccgggaagacagatgcagaaacgctggagcaggagattatcgccgaagccgctgctgta
tctgatccgattgctctcctgggaccggatgaagcgccttaccttggcaaatacgatgaa
ttcatcccccacgacctgctgcgcaaagccttttccctcgacggcctcgacgttccgggg
ctggtagaggtgctgaagcaatgggtgagggtggattaa

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