Paenibacillus sonchi: JI735_27995
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Entry
JI735_27995 CDS
T07264
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
pson
Paenibacillus sonchi
Pathway
pson02020
Two-component system
pson02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pson00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JI735_27995
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JI735_27995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pson03021
]
JI735_27995
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pson02035
]
JI735_27995
Transcription machinery [BR:
pson03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JI735_27995
Bacterial motility proteins [BR:
pson02035
]
Flagellar system
Flagellar assembly proteins
Stator
JI735_27995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
HTH_38
PhyR_sigma-like
HTH_16
HTH_23
CtpB_N-like
7TMR-HDED
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
QQZ60319
UniProt:
A0A974PA91
LinkDB
All DBs
Position
complement(6253244..6254032)
Genome browser
AA seq
262 aa
AA seq
DB search
MNEHKATQSETDGLWEQWKEHGNPEAKKKLIESYLHIVDYVSSRLAVGLPKNVSKDDLAS
NGVMGLIDAIEKFDYKRGLQFQTYASWRVRGAILDSLRQSDWVPRSVREKAKKIEDAYQQ
LEQKYLRSVSDEEMSQYLNITEPEFQNMLQDVAVMSLCSLEDPIREEESETRMSILVDDK
AKNPDRKVNEFYLRDTLTKGIEKLTVKERTVVSLLYYEDLSLSEIAEVMSLSPSRISQLH
SKAILRLRGTLEKNRDLLMQND
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgagcataaagctactcaatcagaaactgacgggctctgggagcagtggaaagag
cacgggaatcctgaagccaaaaagaagctgattgagagttatctccatattgttgactac
gtatccagccgtttggcagtgggactgcctaagaatgtatccaaagacgatttggccagc
aatggtgtgatgggcttgattgacgcgattgagaagtttgattacaagcgggggctccag
tttcagacctatgcatcctggcgtgtgcgcggagcgatccttgactcgttgcggcaaagt
gactgggttcccagatcggtgcgggaaaaagccaaaaaaatcgaggatgcctaccagcag
ctggaacagaaatacttgagatctgtgagtgacgaggaaatgagccagtatttgaacatt
acggagccggaatttcaaaatatgctgcaggatgtggcggtcatgtcgctatgctcgctt
gaggatcccatccgtgaagaagaatcagagacccgtatgtccatattggtggacgataaa
gccaagaacccggatcgaaaagtgaatgaattttatctacgagataccctgaccaaaggc
atcgagaaattaacagtgaaagaacggacagttgtgtcccttttatattatgaagatttg
tcattgagcgagatcgccgaggtgatgtcactgtctccttcacggatttcgcagcttcat
tccaaagctattttgcggctgagaggaacacttgagaaaaaccgggatcttctcatgcaa
aacgactaa
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