Paenibacillus sonchi: JI735_32435
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Entry
JI735_32435 CDS
T07264
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
pson
Paenibacillus sonchi
Pathway
pson02020
Two-component system
pson02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pson00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JI735_32435 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JI735_32435 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pson03021
]
JI735_32435 (rpoN)
Transcription machinery [BR:
pson03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JI735_32435 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
Sigma70_r4
HTH_IclR
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
QQZ61053
UniProt:
A0A974PCV9
LinkDB
All DBs
Position
complement(7203193..7204290)
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AA seq
365 aa
AA seq
DB search
MDTKQKMGLSPGLRQSVEVLQMDSQELDQYVHRLSEENPLIEVQYSWGGSSVKGCKSTQH
LLQYAAGPRHNLQDQLLSQLTLLPLTKSERLLAAYLIGCLDDNGYFAEQVEVVAAGLGVG
CQVIEAGLRRVQSLEPYGVGARNLQECLLLQLEHSGRLTPLLRLLIEHHLEQLGGNQLVR
VAKELNTSLKRVQEAYSTIKSLNPRPAYVLDNGETTVYIVPDVYVMQKNGAYEAAVHPLS
SPQITLAESYQRLLSLSGDEETRRYLQEKNEQASWIMRCLEERKKTLCRVAGAILKLQRP
FFERGQDYLAPLTLGRIAEELELHESTVSRAVRGKYMQCVWGTFELKYFFPSAIAGKTAI
GHRMP
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggataccaagcaaaaaatgggtttgtctcccgggctgcggcaatccgtcgaggtgctg
caaatggattcgcaagagctggaccaatatgtacaccggttgtcagaggaaaatccgttg
attgaggtgcagtattcttggggcggcagcagcgttaagggctgtaaaagcacgcagcat
ttgctgcagtatgcggcaggtccccggcacaatctgcaggatcagctgctgtcgcaatta
acgctgctgccgctgaccaagagtgaacggcttcttgcggcttatctgattggctgcttg
gatgacaacgggtattttgcggaacaggtggaggtggttgcagccggactgggagtcggc
tgtcaggttatcgaagccggactgagacgtgtccagtccctggagccttacggagtcggc
gccaggaatttgcaggaatgtctgctgctgcagctggagcattccggcagattgacgcct
ttattacggctgctgatcgaacaccatcttgagcagttgggcggcaatcagctggtccgt
gtcgccaaagaactgaacacttccctaaaaagggttcaggaagcatacagtacgattaaa
tctttaaacccccgtcccgcgtatgtcttggataacggggagacaacggtgtacattgta
ccggatgtgtacgttatgcagaagaacggcgcgtacgaagccgccgtgcatcccttgtcc
agcccgcagattacccttgccgaaagctatcagcgcctgctcagcctgagcggtgacgaa
gaaacgcgccgctatttgcaggagaagaatgaacaggcaagctggatcatgagatgcctc
gaagagcgcaagaagactttgtgccgcgtagccggcgccatattgaagctgcagcggcct
ttttttgaaaggggacaggattatctcgctcccttaacgctcggcaggatagccgaagag
ctggagcttcatgagtccacggtaagccgggcggtccggggcaaatatatgcaatgtgta
tggggaacctttgagctgaaatatttttttccttccgcaattgcggggaagacagcgatt
ggacaccggatgccctga
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integrated database retrieval system
