Paenibacillus sophorae: KP014_00040
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Entry
KP014_00040 CDS
T07500
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
psop
Paenibacillus sophorae
Pathway
psop03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psop00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KP014_00040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psop03021
]
KP014_00040
03400 DNA repair and recombination proteins [BR:
psop03400
]
KP014_00040
Enzymes [BR:
psop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KP014_00040
Transcription machinery [BR:
psop03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KP014_00040
DNA repair and recombination proteins [BR:
psop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KP014_00040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
PASTA
OPA3
Motif
Other DBs
NCBI-ProteinID:
QWU15719
LinkDB
All DBs
Position
complement(5851..6795)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEANDEGTYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDG
VLHEFSTVPGVMEDVTEIILNLKALSLKIHSDEEKVFEIDAEGEGVVTAGDIRADSDVEI
LNPDLHIATLGPGARLHMRIFAGRGRGYVQADRNKREDQPIGVIPVDSIYTPISRVNYTI
DNTRVGQVTNYDKLTMEIWTDGSIRPEEAVSLGAKILNEHLVLFVGLTDEAKDAEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTTKTEEDMMKVRNLGRKSLEEVQ
EKLEELGLGLRTEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgatagaaatcgaaaagccgaagattgagaccgtagaagctaatgatgaaggaacctat
gggaaattcgtagtagaaccgctggaacgtggatatggcacgactctggggaactcgctt
cgccggatactgctgtcctcccttccgggagccgcagtgacctcggtccaaattgacggc
gttctgcatgagttctccaccgttcccggcgtaatggaagacgtgaccgaaatcattttg
aacctcaaagctctttccctgaagattcattcagacgaagagaaagtgttcgagattgat
gctgaaggggaaggcgtcgtaaccgcaggtgacatccgtgcggacagcgatgttgagatc
cttaacccggaccttcatattgcaacgctgggacctggcgcgagacttcacatgcgtata
tttgcaggccggggtcgcggctatgtccaagcggaccgtaacaagcgcgaagaccagccg
atcggcgtcattccggtagattccatctacactccgatttcccgtgtgaattacacaatc
gacaatacccgtgtcggtcaagtgaccaactacgacaagttgacgatggaaatctggacc
gatggcagcatcagaccggaagaggctgttagccttggagccaaaatcttgaatgagcat
cttgtattgttcgtaggtcttacggatgaagcaaaagatgccgagattatggttgaaaaa
gaagaagacaaaaaagaaaaagtgcttgagatgacaatcgaagagctggatctttcggtc
cgttcctacaactgtctcaaacgcgccggcatcaatacggtgcaggagcttaccacgaaa
acggaagaagatatgatgaaggtccgcaacctgggccgcaaatctttggaagaagttcag
gagaagctcgaagagctcggtttgggtctgcgtaccgaagaataa
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