Paenibacillus sophorae: KP014_03355
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Entry
KP014_03355 CDS
T07500
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
psop
Paenibacillus sophorae
Pathway
psop03030
DNA replication
psop03430
Mismatch repair
psop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KP014_03355 (holB)
03430 Mismatch repair
KP014_03355 (holB)
03440 Homologous recombination
KP014_03355 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psop03032
]
KP014_03355 (holB)
03400 DNA repair and recombination proteins [BR:
psop03400
]
KP014_03355 (holB)
Enzymes [BR:
psop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KP014_03355 (holB)
DNA replication proteins [BR:
psop03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KP014_03355 (holB)
DNA repair and recombination proteins [BR:
psop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KP014_03355 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_30
DNApol3-delta_C
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
QWU16318
LinkDB
All DBs
Position
696841..697815
Genome browser
AA seq
324 aa
AA seq
DB search
MPFGDILGQTTAKRILQNSLRKGTLGHAYLFSGPAGSGQMKTAVTLAQAIFCTALEDDAC
GECLECRKVEHGNHPDLKILSPEGNSIKIDQIRDLQRVFSYRAEGGHPKVYIIDEAGKMT
VQAANSLLKFLEEPPVPAVAILIADNNQSLLPTIQSRTQRIPFAPLSPEMMMQVLSNEGV
SAPLARCAASLTSGLEGCRELLEQNWFAEIRNLVLQLAKESLGKNGSAVATAGQKLFKTG
LGEHLDTCFSMFHLWFKDMLYFLYRKHESIVFIDQLDLISNYARMRTSSQWVAYMDYAAE
SKKKLRFNVNAQLCLEQFLIRLES
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgccttttggtgatatattgggacagacaaccgccaagcgtattttgcaaaattcgctg
cgtaaaggtacgctcggtcatgcttatttgttcagcggtccagcgggcagcggtcagatg
aagacggcagttacattggcccaagcgattttttgtacggcactcgaggatgacgcctgc
ggcgagtgtctggaatgccgcaaagtggagcatggcaaccatccggatctcaagatactg
tcgccggaaggcaacagcatcaaaatcgatcagatccgcgacctgcagcgggtcttttcc
tatcgggcggagggcggccaccccaaggtatacattatagacgaagcgggaaaaatgacc
gtccaggcagccaacagtctgcttaaatttttggaagagcctccagtgcctgccgtagct
attcttattgccgataacaaccaatcgttgctgccgaccattcagtcgcggacacagcgc
atcccgtttgctccactgtccccggagatgatgatgcaggtattgtcaaatgagggggtc
tctgctccccttgcacgctgcgcggcatctttgacatcaggattggaaggatgcagagag
cttttggaacagaattggtttgcagaaataagaaatctagtgttacaattagcgaaggag
tctttgggcaagaacggctctgcggtggcgaccgcaggtcagaagctgttcaagaccggg
cttggtgagcacttggatacctgtttcagtatgttccatctatggtttaaagacatgctc
tacttcctgtaccgaaaacacgaaagcatcgtttttatagatcaattggaccttatttcc
aattacgccagaatgcgtacttcttctcagtgggtagcctatatggattatgccgctgag
agcaagaagaagctgcggttcaatgtcaatgcccagttatgtctggagcagtttttgata
cgtctggaaagctga
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