Paenibacillus sophorae: KP014_03820
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Entry
KP014_03820 CDS
T07500
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
psop
Paenibacillus sophorae
Pathway
psop03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psop00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KP014_03820 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psop03021
]
KP014_03820 (rpoE)
03400 DNA repair and recombination proteins [BR:
psop03400
]
KP014_03820 (rpoE)
Transcription machinery [BR:
psop03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KP014_03820 (rpoE)
DNA repair and recombination proteins [BR:
psop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KP014_03820 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Mnd1
DUF4777
Motif
Other DBs
NCBI-ProteinID:
QWU16393
LinkDB
All DBs
Position
793316..793879
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AA seq
187 aa
AA seq
DB search
MSTPLNLKLDPEKIKEMPMVDLAFLILKAANTPFYYRDLMAEVAKLRGMSDEQINDTIAQ
LYTEINIDGRFACVGTNLWGLKRWYPLERSDDPIGNSKRPRIINDEDDDIDDDDFTEEED
AYSGDEEDFDVIDEDRDDLYSDDDSEEEVDEEVVMDDEDLDEEDLDDEESEEETEEEGSD
EEDDDKF
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
gtgagtacgccacttaatttgaagctcgatcctgaaaaaatcaaagaaatgccgatggta
gacttggcttttctaattctgaaggcggccaatacgccgttctattaccgtgatctgatg
gctgaggtggccaagctgcgcggaatgtccgatgaacaaatcaacgatacaatcgcccag
ttatataccgaaattaacatcgacggacgttttgcctgtgtcggaacgaatctgtggggc
ctgaaacgctggtatccgctggaacgctccgacgatccgatcggcaattccaaacgtccg
cgcatcattaatgatgaagacgacgatatagacgatgacgattttaccgaggaagaagat
gcttactcgggcgacgaagaagacttcgacgtgatcgacgaggaccgcgacgatttgtac
tctgatgatgacagcgaagaggaagttgatgaagaggtcgtcatggatgatgaagatctg
gacgaagaggatttggacgacgaggagtccgaggaagagaccgaagaagaaggctcggat
gaggaagacgacgacaaattttaa
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