Paenibacillus sophorae: KP014_08140
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Entry
KP014_08140 CDS
T07500
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
psop
Paenibacillus sophorae
Pathway
psop03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KP014_08140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psop03400
]
KP014_08140
Enzymes [BR:
psop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
KP014_08140
DNA repair and recombination proteins [BR:
psop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KP014_08140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QWU17127
LinkDB
All DBs
Position
1744380..1744922
Genome browser
AA seq
180 aa
AA seq
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MNPVEDHMDYGLQIVFIGFNPSLRSGEVGHHYANPRNNFWRILYRSGLTPRLYDASEDGD
LLKLGYGFTNIVARPTRGAEDITREEYGEGRELLRAKLAEYRPQIACFVGKGVYTEFSRR
TKANWGFQEGMDPVVDGVREFVAPSSSGLVRMAMDEIIGIYRRLNEATRERPDPESDFPG
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgaacccggtggaggatcacatggactacgggttgcaaattgtatttatcggctttaac
ccgagcctgcggtcgggagaagtcggccatcattatgcgaatccgcgcaataatttctgg
agaatactgtaccgcagcggacttacgccgcgactgtacgacgcttccgaggatggcgac
ctgctgaagctgggctatggcttcaccaatatcgtcgctcgtcccactcggggcgccgag
gatattacccgggaggagtacggggaaggacgcgagctgctgcgcgccaagctagcggag
taccggccgcaaatcgcctgtttcgtcggcaagggcgtgtacacggaattcagccgcagg
acgaaggccaactggggctttcaggagggtatggacccggttgtggacggggtgcgcgaa
tttgtcgcaccgtcgtcaagcgggctggtgcggatggcgatggatgaaatcatcgggatt
taccgcaggctgaatgaggccacccgggaacggccggacccggaatccgatttcccgggt
taa
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integrated database retrieval system
