Paenibacillus sophorae: KP014_08420
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Entry
KP014_08420 CDS
T07500
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
psop
Paenibacillus sophorae
Brite
KEGG Orthology (KO) [BR:
psop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psop03016
]
KP014_08420 (thpR)
Enzymes [BR:
psop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
KP014_08420 (thpR)
Transfer RNA biogenesis [BR:
psop03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
KP014_08420 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
DUF7204
Motif
Other DBs
NCBI-ProteinID:
QWU17175
LinkDB
All DBs
Position
1804882..1805430
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AA seq
182 aa
AA seq
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MRLSPELRGAVGGMCRTLSRELSFAKWTHEEDYHITLQFLGDTDPRSIPELVSALKEAAA
DCRPFTLSLREAGIFGPPAAPRVLWAGVGGETDRLQELHNRIVAATLPLGFHAEERAYKP
HVTLARKYRGERVFNSGHLNAFKQEADALHMSWRVEEWVLFVTRMHKKPMYEIVETLTIS
KK
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
gtgagattgtcacctgagcttcgcggggccgtaggcggcatgtgccgcactctgtcacgg
gagctgtcctttgccaaatggacgcatgaagaggattatcatataacgcttcagtttctg
ggcgataccgacccgcggtccattccggagttagtgtcggcgctgaaggaggcggcagcg
gactgcaggccgttcaccttgtctttgcgggaagcaggcatcttcgggcctccggctgct
ccgcgcgtcctatgggcgggagtggggggtgagacggaccggctgcaggaattgcataac
cggatcgtggcggctacgcttccgctgggatttcacgccgaggagcgcgcttataagccc
catgtgacgctggcccgtaaatataggggagagcgtgtttttaactcaggacatcttaat
gcgtttaagcaggaagcggatgctcttcacatgtcctggagagttgaggaatgggttctt
tttgttacgcgaatgcacaaaaaaccgatgtatgaaattgtcgaaacattaacaatttct
aaaaagtag
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