Paenibacillus sophorae: KP014_10240
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Entry
KP014_10240 CDS
T07500
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
psop
Paenibacillus sophorae
Pathway
psop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KP014_10240 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psop03019
]
KP014_10240 (recQ)
03400 DNA repair and recombination proteins [BR:
psop03400
]
KP014_10240 (recQ)
Enzymes [BR:
psop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KP014_10240 (recQ)
Messenger RNA biogenesis [BR:
psop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KP014_10240 (recQ)
DNA repair and recombination proteins [BR:
psop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KP014_10240 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
Helicase_Sgs1
ResIII
HHH
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QWU17486
UniProt:
A0ABX8HH03
LinkDB
All DBs
Position
2150329..2152173
Genome browser
AA seq
614 aa
AA seq
DB search
MNPQELTMEYAQEMLQKYYGYPDFREGQKKIVASLLEGRDTLGIMPTGGGKSICYQVPAL
LLPGLTLVVSPLISLMKDQVDALTTAGIPAAYINSTLTGKEVNERIRAARRGELKLLYVA
PERLELDWFRLEMAELSISCVAVDEAHCVSQWGHDFRTSYLAVSPFVEELPERPILAAFT
ATATPEVMEDMLRLLRLRGPDVFVTGLGRDNLAMSVLRGENKKEFVLEYAASHAHQPGIV
YAATRKEVDDLYQRLRNAGFAAGRYHAGMSDDERAESQEAFLYDDIRVMVATNAFGMGID
KSNVRYVIHYNMPKNMEAYVQEAGRAGRDGEPSQCILLFSAQDIMTQKFLIEQNPQDSER
KQNEYRKLQQMIDYCYTTRCLRSAMLDYFGEVHGDKPCGICSSCTDERELVDMTIDAQKI
FSCIHRMRERFGVALVSSVLKGSRSQKVLQYGFDKLPTHGAMSGRTEKEITEIVNVLISE
GYLALSEGQYPVVRLQQPAAEVLRGQREVRQRVARPTRPSVGGRDRSRSRDLSPSAVNET
VFEQLRLIRRELAGREHVPSYIIFNDATLREMSVVCPQTEEEMMKVKGVGEVKYRKYGKE
FLDFFQSELYSNES
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgcaagagcttacgatggaatatgcgcaggaaatgctgcagaaatattacggt
tatcccgatttccgggagggccagaaaaaaatcgtcgcgagtctccttgaaggccgcgat
acgctcggcattatgccgaccggcggcggtaaatcgatctgctaccaggtgccggcgctg
ctgcttccaggcttgacgctcgtcgtttcgccgctgatctccctgatgaaggatcaggtc
gacgcgctgacgacggcgggtatcccagccgcttatatcaacagcaccttaaccggcaaa
gaggtgaacgagcgcatccgcgccgcccgccggggcgagctgaagctgctctatgtcgcg
cccgagcggctggagctggactggttccgcctggaaatggcggagctgtccatttcctgc
gtcgcggtggacgaggcgcactgcgtctcgcagtgggggcatgatttccgcaccagctat
ctggcggtatcgccgtttgtggaggagcttccggagcggccgattctggcggccttcacg
gcgacagcgacgccggaggttatggaggatatgctccggctgctgcgtctgcggggtccg
gacgtctttgtgacgggccttggccgcgacaatctggcgatgtcggtgctgcggggcgag
aacaagaaggagttcgtgctggagtatgccgcttcgcatgcccaccagccggggattgtg
tacgcggctacccgcaaggaggtcgacgacctgtaccagcgtctgcggaatgccggattc
gcggcgggccgctaccatgccggcatgagcgacgacgagcgggccgagagccaggaggcg
tttctgtacgacgatatccgcgtgatggtcgcgaccaacgccttcggcatggggatcgac
aagtcgaatgtgcggtatgttatccattacaatatgcctaagaacatggaggcttatgtc
caggaagcgggccgcgcagggcgggacggcgagccgagccagtgcatcctgctgttcagc
gcgcaggatatcatgacccagaagttcctgattgagcagaacccgcaggactcggagcgt
aaacagaatgaataccgcaagcttcagcagatgatcgattactgctatacgacccggtgc
ctgcgaagcgccatgctggactatttcggcgaggtccacggggacaagccgtgcggcatt
tgcagctcctgcacggatgagcgcgagctcgttgacatgaccatcgacgcgcagaagatc
ttctcctgcatccaccggatgcgcgagcgtttcggcgtggcgctggtgtcgtccgtgctg
aagggctcgcgcagccagaaggtgctgcagtacggcttcgacaagctgccgacccatggc
gccatgtccggccgcaccgagaaagaaattacggaaatcgtcaatgtgctgatttccgaa
ggctatctggccttgtccgaaggccagtacccggtcgtgcggcttcagcagccggcagcc
gaggtactgcgcgggcagcgggaggtgcggcagcgcgtcgcccggccgaccaggccgtcc
gttggcggcagggaccgcagccggagccgcgatctctcgccgtcggccgtcaacgagacg
gtgttcgagcagctgcgcctgatccgccgcgagctggcgggccgggagcatgtgccgtct
tatattattttcaacgacgccactcttcgggagatgagcgtggtatgccctcaaacggaa
gaagaaatgatgaaggttaagggcgtcggggaagtgaaataccggaagtatgggaaggaa
tttctggatttttttcaaagcgaattgtattccaatgaatcgtaa
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