Paenibacillus sophorae: KP014_12745
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Entry
KP014_12745 CDS
T07500
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
psop
Paenibacillus sophorae
Pathway
psop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KP014_12745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psop03019
]
KP014_12745
Enzymes [BR:
psop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KP014_12745
Messenger RNA biogenesis [BR:
psop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KP014_12745
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QWU17917
UniProt:
A0A1H8MQY8
LinkDB
All DBs
Position
2706493..2707887
Genome browser
AA seq
464 aa
AA seq
DB search
MNFKDLNLIPPLLKALDKENYTTPTPIQEKSIPSVLAGRDLFGCAQTGTGKTAAFSLPII
QLLHEQPSRSGSARPIRALILTPTRELALQIADNIGAYSKFTSLRCTAVVGGVSQRVQER
ALGLGTDILIATPGRLIDLINQKRVDLQKVQILVLDEADRMLDMGFINDVKRIIAKMPAK
RQTLFFSATMPPEIANMVKSLLVNPVKVEITPVSSTVDRIKQLLYLVEKGTKQKLLNRLL
QDQTIVSALVFTRTKRGADRVTRELTKAGITAQAIHGNKSQTDRQNSLRNFKNGTTRVLV
ATDIAARGIDIDELAHVINYNLPQIPETYVHRIGRTGRAGLSGTAISFCETEELPFLKDI
EKLIGKKIPEVKDHAFRMERTPESLKRDRQSKPAVAKPAKPSKSSKTANSSTLVKPKANR
DRKPKSEGFKQGNPAHGKANGKAREAARGSGRTARSTASNKAGR
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaaagatttgaatctgattcctccccttttgaaagctttggacaaagaaaat
tatacaacgccaacaccgatacaggagaagtctattccgtccgttttggccggcagagat
ttgtttggctgtgcgcagaccggaacggggaaaaccgccgctttttctttgccgattatc
cagctgctccatgagcagccaagccgatcgggttcagcgagacctatccgcgccttgatt
ctgaccccgaccagagagctggcgctgcaaatcgcggacaatattggggcgtacagtaag
ttcacctccttacgctgcacagcggtcgttggcggtgtatcccaaagagtccaagaaagg
gcgctgggtctcggaacggatatcctgattgccacaccgggcagactgatcgacctgatc
aatcagaagcgggtggatctgcaaaaggtgcaaattctggtgctggatgaagctgataga
atgctggatatgggctttatcaacgatgtgaagcggattattgccaagatgcccgccaaa
agacaaacgcttttcttctcggcaacgatgcccccggaaatcgccaacatggtcaagtcg
cttctggtgaatccggtgaaggttgaaatcactccagtatcgtctacggttgaccgtatc
aagcagttgctctatctggtggaaaagggcaccaagcagaaactgttgaaccggctgctg
caggatcaaacgattgtttccgctttggtgtttacacggaccaaacgcggcgcggaccgt
gtcacccgagaattgaccaaagcgggcattaccgcacaggccattcacggcaacaaatcg
caaacggaccgtcagaattccctgcgaaactttaaaaacgggacgacccgcgtgctggta
gcgacggacatcgccgcccgggggattgatattgacgagctcgcgcatgtgatcaactac
aatctgccccagataccggagacctatgttcaccggattggccgtaccggcagagcggga
ctgagcggaacggcgatttctttttgcgaaaccgaagaactcccctttcttaaggatatt
gagaaattaattggcaaaaagattcccgaagtaaaggatcatgcctttaggatggagcgg
actccggagtccctcaagagggacaggcagtcgaaaccggcagtcgctaaacctgctaaa
ccgtccaaatcgtctaaaactgcgaactcgtcaacgcttgtcaagcccaaggcgaaccgc
gaccgcaagcccaaatccgaagggtttaagcaaggcaatccggctcatgggaaggcaaac
ggcaaggcaagggaagcggccagaggaagcggtagaacggcgagaagtacagcgagtaat
aaagcgggcagataa
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