KEGG   Paenibacillus sophorae: KP014_13620
Entry
KP014_13620       CDS       T07500                                 
Name
(GenBank) 3'-5' exoribonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
psop  Paenibacillus sophorae
Pathway
psop03030  DNA replication
psop03430  Mismatch repair
psop03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psop00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KP014_13620
   03430 Mismatch repair
    KP014_13620
   03440 Homologous recombination
    KP014_13620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psop03032]
    KP014_13620
   03400 DNA repair and recombination proteins [BR:psop03400]
    KP014_13620
Enzymes [BR:psop01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     KP014_13620
DNA replication proteins [BR:psop03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     KP014_13620
DNA repair and recombination proteins [BR:psop03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     KP014_13620
SSDB
Motif
Pfam: RNase_T DEDDh_C Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: QWU18070
UniProt: A0A1H8TWV4
LinkDB
Position
2905491..2906240
AA seq 249 aa
MKEPNKGGGFWNNLRHGGMPSAIASIRGGESAQQTAQQMAFIRSLMREKRRPEVLHTPLS
ELETIVFDLETTGFSSQHGDEILSFGAIKVVGEEVMEDEYFYTLVNCQTSIPANITELTG
ITEEMCKAAPSLIDGLHNFMSFVGKRVLVAHASAHDKSFLNAALWKTSKVQLTHRVLDTM
MLARWLEPNRGNYTLDELLTVHGIPICGRHNALEDAKMTAKLWVSYLREISQHKKVETLG
DLYAYLSRT
NT seq 750 nt   +upstreamnt  +downstreamnt
atgaaggagccgaacaaaggcggcgggttctggaacaacttgagacacggcggcatgccg
tctgcgatcgcttcgattcgtggcggtgaatccgcacagcagaccgctcagcaaatggct
tttatcaggtctttgatgagggagaaacgccggccggaggtgctgcatactccgctgtcc
gagctggagaccattgtgtttgatttggaaactactggattttccagtcaacacggggat
gagattctgtcatttggggcgattaaggtcgtcggggaggaggtcatggaggacgagtac
ttttacacgcttgtcaattgccagacctctattccggcgaatattaccgaattgacggga
attaccgaagaaatgtgcaaagctgcgccttcacttattgacggacttcataattttatg
tcatttgtaggtaaaagagtattggtcgctcatgccagtgctcatgacaaatcgtttctg
aacgctgcgctttggaagacatccaaggttcagttaacccaccgcgtgctggatacgatg
atgcttgcgcgctggctggagccaaaccggggcaactacacgcttgatgaactgctgacg
gtgcatggcatcccgatttgcggaagacataacgcgctggaagacgccaaaatgacggct
aagctctgggtgtcttacctgcgtgaaatttcccagcacaagaaggtggagacactggga
gacctatatgcttacttgagcagaacctga

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