Paenibacillus sophorae: KP014_16140
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Entry
KP014_16140 CDS
T07500
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psop
Paenibacillus sophorae
Pathway
psop03420
Nucleotide excision repair
psop03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KP014_16140
03430 Mismatch repair
KP014_16140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psop03400
]
KP014_16140
Enzymes [BR:
psop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KP014_16140
DNA repair and recombination proteins [BR:
psop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KP014_16140
MMR (mismatch excision repair)
Other MMR factors
KP014_16140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PhoH
AAA_30
SLFN-g3_helicase
DEAD
AAA_16
NACHT
Catalase_C
nSTAND3
ResIII
Motif
Other DBs
NCBI-ProteinID:
QWU13524
LinkDB
All DBs
Position
3419421..3421769
Genome browser
AA seq
782 aa
AA seq
DB search
MSINETEWKEEQNRVDRVTGLLKRHIRALSEELGLHRSDVVELRKDFWEEVTVNFSSPDD
LGETSTSLRQQAQVLSERERHHLQSSKALKKYKKLVLSPYFGRIDFAEAPEGETERIYLG
IGSLMEDDGTFLIYDWRAPISSLYYDGAPGAASFETPAGTVSGEMSTKRQFVIVDGKIEV
MFDTGVTIGDELLQQVLSHSADDRMKNIVATIQKEQNAIIRNDRSRMLVVQGAAGSGKTS
AALQRVAYLLYKYRDTLQADQVLLFSPNPLFNSYVSTVLPELGEDNMQQTTFQIYLEHRL
GQEFQLEDVFTQTETLLNSPEGPETDARRDGIAYKSSVAFLDVIRSYAFRLEHEGMLFKP
LMFQGRAIVGKDEMERKFYSYDPSIRLANRIDLMTGWLLKKIAVFSSEERSAAWVEDQIE
LLDSGEYHRAYQMMRRKQRGKEETFDDFEMEKEMLARYVVSQRLKPLRGWVKRGRFVDAK
GLYSRLFQDRELLESLNGGTALPESWNVISRQTMNALADGNLSYEDATPFLYLKELSQGF
HTNTVIRHVFVDEVQDYSPFQLEFMRRMFPRAKMTVLGDLNQAIYAQGEALGELAGLVSI
YGEENTEVVSLTQSYRSTYEIVEFTRSMIPGGDRIIPFNRRGEEPLLMEVSDREELISRV
EEDILDLHSQGYHYVAVICKTAEESARIYGGLKDKLSIQLVTKDTPNFQKGTLVLPAYLA
KGVEFDAVIICDGSEESYGRESERKLFYTACTRAMHILHIFYLGKPSRFIPVKSLETGTH
VQ
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
gtgtccattaacgaaaccgaatggaaagaagaacagaatcgggtagaccgcgttaccgga
cttctgaaacgtcatatccgggccctctcggaggagctgggactgcaccgcagcgatgtg
gttgagcttcgcaaggatttctgggaagaggtaaccgtcaacttcagcagccccgacgat
ctcggcgagacctccacaagtctgcggcagcaggctcaggtcttgtcggagcgcgaacgc
catcatttgcaatccagcaaagcgctgaaaaaatataagaagcttgtcctatccccttac
ttcggacgcatcgatttcgctgaagcgcctgaaggggagacggaacgcatttatctgggc
ataggctccctcatggaagatgacggcacttttctgatctatgactggcgggcgccgatt
tcaagtctgtattatgacggcgcgccgggagccgcatccttcgagaccccggcagggacc
gtaagtggagaaatgagcacaaagcgccagttcgtcatcgtggacggaaagattgaggtg
atgttcgataccggcgttacgataggagacgagctgcttcagcaggtgctcagccacagc
gcagacgaccggatgaagaatattgtggccacaattcagaaagagcagaacgccattatc
cgcaacgaccgcagccgaatgcttgttgtccagggggctgccggcagcggcaagacatcc
gctgcgctccagcgggtcgcctatctgctgtacaaataccgcgacaccctccaggccgat
caagtccttctgttctctccgaatccgctgttcaacagctatgtgtccaccgttctaccc
gaactgggcgaggacaatatgcagcagacgaccttccagatatatttggagcaccgactg
ggtcaagaatttcagctagaggatgtattcacccagacggaaacgctgctgaacagcccg
gaaggccccgagacggacgcccggagggacggaatcgcctataagtcctcggttgcgttt
cttgatgtcattcgcagctatgcgttcaggctggagcatgaagggatgctcttcaagcca
ttgatgttccagggccgggccattgtggggaaagatgagatggagagaaagttctacagc
tatgacccttccatcaggctggcgaaccggatcgaccttatgaccggctggctgctgaag
aagatcgctgtgtttagcagtgaggagcgcagtgcggcttgggtagaggatcagatcgag
ctgctggactccggtgagtaccaccgcgcttatcaaatgatgaggcgtaagcagcggggc
aaggaggagacgttcgacgattttgagatggaaaaggaaatgctcgcccgctatgtggtc
agccagcgcctcaagccgctgcggggttgggtcaagcgcggccgttttgtcgacgccaaa
gggttatattcccggctgtttcaagacagagagctgctcgaaagcttgaacggcggcacc
gcgcttccggagagctggaatgtgatcagcagacagacaatgaatgcgctggcggatggc
aatctttcgtacgaggacgccacgccgttcttatatctgaaagagctcagtcagggattt
cataccaataccgtcattcgccatgtgttcgtggatgaggtacaggattactcgccgttc
cagctggaatttatgcggcgcatgtttccaagggccaaaatgactgtgctgggcgatctc
aaccaggcgatttatgcccagggagaggcgcttggcgagctggcgggactggtgagcatt
tacggggaagaaaatacggaagttgtgtccctgacgcaaagctatcgttccacctatgaa
attgttgagtttactcgttcgatgatccctggcggcgaccggattattccattcaaccga
agaggggaagaacctttgttaatggaagtatccgatagggaagagttgatctcccgggtg
gaagaggatattctggacctgcactcccaaggctatcattacgttgcggtgatctgcaag
acggctgaggaaagcgcccgaatatatgggggtcttaaagataaactatcgatacagctt
gtgaccaaagatacgccgaattttcagaaaggaacgctggttctgccggcttatctggca
aaaggggtcgagttcgacgcggtgattatttgcgacggctccgaggaaagctatggcaga
gagagcgagcggaagctgttctacacggcctgcacacgggcgatgcatatcctgcacatt
ttttaccttgggaaaccgagccgatttatacccgtcaaatcgctggagaccggtactcat
gtccaataa
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integrated database retrieval system
