Paenibacillus sophorae: KP014_19950
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Entry
KP014_19950 CDS
T07500
Name
(GenBank) hypothetical protein
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
psop
Paenibacillus sophorae
Pathway
psop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KP014_19950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psop03400
]
KP014_19950
Enzymes [BR:
psop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
KP014_19950
DNA repair and recombination proteins [BR:
psop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KP014_19950
RecFOR pathway proteins
KP014_19950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
HTH_52
DUF4290
Motif
Other DBs
NCBI-ProteinID:
QWU14188
LinkDB
All DBs
Position
complement(4234780..4235340)
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AA seq
186 aa
AA seq
DB search
MVVNKEFKHYLYAFDLSMESTGLTIFDLDLRTPVLVTSISTSHLKKSATHGQKLKYMADE
IIKIGKLYPPCEVAIERGYSRFNTATQVIFRVHGLINYLFYNYPQTYYPPKSVKESICRG
DATKKYVQETIHKVYPEVEFANEDESDSFAIALTYLIKNNLIEWNKTEIKKKAIRKRSNK
KKDEGN
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggttgtaaacaaagagttcaaacattacctttatgctttcgatctgtctatggaatcc
accgggttaacaatttttgatttagatttgcgaacacctgtgttagttacaagtatttca
acttcacacctcaaaaaatcagcgacacatgggcagaaacttaaatacatggcagacgaa
ataataaaaataggtaaactatatccaccttgtgaagttgcaattgaacgcggttatagc
cgttttaatactgcaacacaagtaatctttagggtgcatggtttaattaattatctattc
tataactacccacaaacatactatcctccaaaaagtgtgaaggaaagtatttgtcgtggt
gacgcaacaaaaaaatatgttcaagaaacaatacataaagtttatccagaagttgagttt
gccaatgaagatgaatcagattcatttgctattgctcttacatatttgattaagaacaat
ttgattgaatggaataagacggagattaagaagaaggcaattaggaagaggtctaataag
aagaaagatgagggcaactaa
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