Paenibacillus sophorae: KP014_20125
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Entry
KP014_20125 CDS
T07500
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
psop
Paenibacillus sophorae
Pathway
psop00230
Purine metabolism
psop00240
Pyrimidine metabolism
psop01100
Metabolic pathways
psop01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
psop00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
KP014_20125 (nrdD)
00240 Pyrimidine metabolism
KP014_20125 (nrdD)
Enzymes [BR:
psop01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
KP014_20125 (nrdD)
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Gene cluster
GFIT
Motif
Pfam:
NRDD
ATP-cone
DUF1272
DZR
Gly_radical
Zn_ribbon_3
DUF5056
Zn_ribbon_Top1
DUF2321
DUF7057
DUF2314
Zn_Ribbon_1
Motif
Other DBs
NCBI-ProteinID:
QWU14221
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Position
complement(4255384..4257489)
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AA seq
701 aa
AA seq
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MIKITKKDGTLEDYNEQKIINAVNKSSRRVMINLSDNDYAEICSMVWEKIVEHDTSEIDI
CEMHNIVESSLDEFHPAIAKSYRDYRNYKKDFVHMLDKVYQKSQSIRYIGDTSNANTDSA
LVSTQRSLIYNELNSELYKKFFLNVEERQAAKDGYIYIHDRSARLDSINCCLFDISNVLN
GGFEMGNVWYNEPKTLDVAFDVISDVAMSAASQQYGGFTLPRIDTVLTKYAKLSYEKYYE
EYLDIVSFVDIKDKELKADDYATKKVYRDMEQGFQSWEYRFNTVGSSRGDYPFIATSFGV
GTSKFEQMVTEAILKVRMGGQGKTGLKKPVLFPKLTFLYDENLHGEGKQLEYLFDIAIDC
SSKSMYPDFLSLSGDGYIPSIYKKYGKVISLMGCRASLSPWFERGGMHPLDENDVPVFEG
RHNLGAISLHLPMILAKARHENKDFYELLDYYLELIRQLHIKTRDFLGEKKASTNPLGFC
QGGFLNGNLKPDDKIKSLLKPMTMSFGITALNELQYLYNKKTLVEDNGFALEVMQYINKK
IEQFKEEDKILYAIYATPGESLAGLQVEQFRKKYGIIEGVSDRAYVSNSFHCGVWEDITP
IQKQDYEKQFWDLFNGGKIQYCKYPIAYNKLAQKTLVRRAMKMGFYEGLNLSLSYCEECG
HEQLDMDVCPKCGSELVTKIDRMNGLTKTAHVKLVKLRETP
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
ttgattaagatcaccaaaaaagacggaacactggaagattataatgaacaaaaaattatt
aatgctgtaaataaatcttctcggcgtgtgatgataaatttatcagataacgattatgca
gaaatatgtagcatggtttgggagaaaatcgtagagcatgatacatccgagatcgacatt
tgtgaaatgcataatatcgtagaatcatcattagatgagtttcatccagcaattgcaaaa
tcatatcgtgattacagaaattataaaaaagattttgtacacatgttagacaaagtatat
caaaaaagccagtcgattcgatatataggcgatactagtaatgccaatacagatagcgca
ttagttagtacacaaagaagcttaatttacaatgaattgaatagtgaactttataaaaag
tttttcttaaatgtagaagaacgacaggctgcaaaagatggatacatatatatacatgat
agaagtgcaagactagacagtatcaactgttgtctatttgatatttccaatgtattaaac
ggtggatttgaaatgggaaatgtttggtataatgaaccaaaaacgttggatgttgcgttt
gacgtaattagtgatgtagcgatgagtgcagccagtcaacaatatggaggatttacgctt
ccaagaattgatacagtattgactaagtatgctaaattgtcatatgaaaaatattatgag
gaatatcttgatattgtttcgtttgttgatattaaagacaaagaattaaaggctgacgat
tacgcaactaaaaaggtatatcgtgatatggaacagggttttcaatcttgggagtatcgt
ttcaacacagttggaagttcacgaggagattatccgttcatagcaacaagttttggtgta
ggtacaagtaaatttgagcaaatggtaactgaagctattcttaaagttagaatgggtgga
cagggtaaaacgggcctcaaaaaacctgtattgtttcccaaactgacattcttatatgat
gaaaatctacatggggaaggaaagcaacttgaatatctgtttgatattgcaattgattgt
tcaagtaagtccatgtatccagattttctctcactttcgggagatgggtatatcccgagt
atttataaaaagtatggcaaagtgatttcgctaatggggtgcagggccagtttatctcct
tggtttgagcgtggggggatgcatccattagatgaaaatgacgtacctgtatttgaaggc
cgtcataatctcggagcaatttcgcttcatctcccaatgattttggctaaagcaagacat
gaaaacaaagatttttatgaattgttggactattaccttgaattgattcgtcaactacac
attaagacgcgcgattttcttggtgaaaagaaagcatcaaccaatccacttggattttgt
caaggcggattcttaaatgggaatcttaaaccagatgacaaaattaagtcgctgctaaaa
ccaatgactatgagttttggtattacagctctaaatgaattgcaatatctttacaacaaa
aaaacgcttgtagaagataatggtttcgctttagaggtaatgcaatacataaacaaaaag
atagaacagttcaaagaagaagacaagatattgtatgcaatctacgccacaccgggagaa
tcactcgctggtctacaagtagaacagttcagaaaaaaatatggaatcattgaaggagta
tctgaccgagcatatgtaagcaattcatttcattgtggtgtatgggaagatattactcca
atccaaaaacaggattatgaaaagcaattctgggatctgttcaacggcggcaaaattcag
tattgtaaataccctattgcttataataaattagctcaaaaaacactggttagaagagct
atgaagatgggtttttatgaaggtttaaatctgagtttatcgtactgcgaagaatgtgga
catgaacaacttgatatggacgtgtgtcccaaatgcggaagtgaacttgtaacaaagatt
gatcggatgaatgggttaaccaaaacagcccatgtaaaattggttaaactgcgggaaacc
ccttag
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