Paenibacillus sophorae: KP014_23020
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Entry
KP014_23020 CDS
T07500
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
psop
Paenibacillus sophorae
Pathway
psop03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KP014_23020 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psop03400
]
KP014_23020 (xseB)
Enzymes [BR:
psop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
KP014_23020 (xseB)
DNA repair and recombination proteins [BR:
psop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
KP014_23020 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DUF2802
Motif
Other DBs
NCBI-ProteinID:
QWU14767
LinkDB
All DBs
Position
complement(4747948..4748208)
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AA seq
86 aa
AA seq
DB search
MAKEEAELGFEEAMDQLELIVRELEQGDVPLEKAIDLFQQGMKLSQLCGAKLEQVERKIE
MIVEEDGELRKKPFGSTLEGDGDDSL
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggaagaagcggaactggggtttgaggaggcaatggaccagctggagctgatc
gtgcgtgaactggagcagggcgacgttccgctggagaaagcgatcgatctgtttcagcag
gggatgaagctctcgcagctgtgcggagccaagcttgagcaggtggagcgcaaaatcgaa
atgattgtggaagaagacggagaactgcgcaagaagccgtttggctccacgctggaaggg
gacggcgatgactccttataa
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