Paenibacillus sophorae: KP014_24310
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Entry
KP014_24310 CDS
T07500
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psop
Paenibacillus sophorae
Brite
KEGG Orthology (KO) [BR:
psop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psop03400
]
KP014_24310
DNA repair and recombination proteins [BR:
psop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KP014_24310
Archaeal homologous recombinant proteins
KP014_24310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QWU14997
LinkDB
All DBs
Position
complement(4994317..4997802)
Genome browser
AA seq
1161 aa
AA seq
DB search
MKPILLKVSGLQSYRESQEIDFLSLCETGLFGIFGPTGSGKSSLLDAITLAMYGKVERAV
NGTQGIMNHSEDTLAVAFTFELSSSHGARRYRVERRFKRTGEQSVSNTVSRFVEIGPDGE
TVMADKLADVTSCVEDRIGLKMDDFTRAVVLPQGKFAEFLSLRGVDRRQMLQRLFHLEQY
GDQLALKLSRRVKENEAALRALEAEQQGLGSAGAEDVQAAEKRLAEAVLHAAKCRERLEA
ASRQAERFGKIRELQEERSRREMKQLEFRAQEAQIASMELRLLKSDEAAKIAPALKAWRS
AEEAWRARAALADRLEAHLAVSEQEASRAAEAEQQAHGALAAEEPALREREGRLRQALEL
EAELAGLRQTLAELAERQAEASRGLEASRETLARERELLAKGQKRQQELQRSLQPLEVRS
QERQALQEAMQSLQGLRSAESQWEQAEREGRERAAALGAVQGRLAEAETAAARLAEARSH
AARDAALHLERAASAEEAAAAVAGRLEQAGAALEAALRERELHRLSLALSRELRDGAPCP
VCGSEHHPAPASLQGGEEDLAVERKLQDVKTLTARALEARGMLRSLREQDRAWLEQVYGE
SGSLSGTPAAAGASLAEVGQEIPGLTEIAAALSQAASSDLLADGDAVSSAWPEETAVAEL
EEQLAGLQSCSRDLRRRAVQWQEEDRQAQQRLLKEAADAEAARSWEEQTAAKAEELKRQL
LFLRQEWERRFPQLAPGEAEQAYRELRRKDEEAEEIRGRLDISVKFLDEKSASVQLLQDR
ISELDKELAGWMAQHTGKEELLREKEQRLLQWTEGHSAGSLLAECERRLQELQTAAEEGR
RRNRAAADRAQQDAREAAIARQAADSAREHYAAAAANWEESLASSSFASAAEAEEAALDA
GEREAASSRVRAHRDGEAEVSAQLRHIEERLGGDAVTEDEWRDCENELRQCKEDDEAALQ
AKARGERDLEDLRQRHIRWSELESLRAGHESMQSKLSKLQSCLRGNAFVEYIAEEQLMQV
CQAASQRLRFLSRQRYALEVDSGGGFVIRDDGNGGVKRPVSTLSGGETFLTSLSLALALS
AQIQLRGQYPLQFFFLDEGFGTLDPELLDTVITSLERLHNDQLSVGIISHVPELRARLAR
KLVVVPALPGGAGSSIILEKN
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgatactgttaaaagtaagcgggctgcagagctaccgcgaaagtcaggagatc
gatttcctcagcttgtgcgagaccggactgtttggcattttcggaccaacgggcagcgga
aaatcgagcctgctcgatgccattaccctggcgatgtacggcaaggtggaacgcgccgtg
aacgggacgcaggggatcatgaaccattccgaggatacccttgctgtggcgtttaccttc
gagttgagctcctcccacggggcgcgccgctaccgggtggagcggagattcaaacggaca
ggtgagcagtccgtcagcaatacagtgagccgcttcgttgagattggaccggatggagaa
accgtgatggcagacaagcttgcggatgtgacgagctgcgtcgaggacagaatcgggctt
aaaatggacgattttacccgggctgtcgtcctgccccagggcaagttcgccgaatttctg
tcgctgcgcggagtggaccgcagacagatgctgcagcgcctgttccacttggaacagtac
ggcgaccagttggcgctgaagctcagccgccgggtcaaagagaacgaggcggcgctgcgc
gcgctggaagccgaacagcaggggctgggcagcgctggagcagaggatgtgcaagcggcg
gagaagcgtctagcggaggctgtactccacgccgcgaagtgccgcgagcgcttggaggcg
gcgtcccggcaggccgagcgtttcggcaaaatccgtgagctgcaggaggaacgctcccgc
cgggagatgaaacagctggagttccgggcgcaggaagcgcaaattgcctcgatggagctg
cggctgctgaagagcgacgaagccgccaagattgcgcccgcgctgaaggcatggcgaagc
gcggaagaggcctggcgcgcccgtgccgcgttagctgaccggctggaggcgcaccttgcg
gtgtccgagcaggaggcgtcccgtgccgccgaggccgagcagcaagcgcatggggcgctt
gctgcggaagagccggccctgcgggagcgggagggccggctgcgccaggcgctcgagctg
gaagccgagctggccggactgcggcagacgctcgcggagctggccgagcgccaggcggag
gcctcccgcgggctggaagcctcgcgggagacgctggcccgggagcgggagcttttggcc
aaaggccaaaagcggcagcaggagctgcagcgcagcctgcagccgctcgaggtccgctcc
caggagcggcaggctctgcaggaagcgatgcagagcctgcagggcttgcgctccgccgag
tcccagtgggagcaggcggagcgggaggggcgcgagcgcgccgctgcgctcggcgcggtt
caaggccgtctcgcggaggccgagacggctgctgcgcggctggccgaagcgcgctcgcac
gccgcgcgggacgccgccctgcatctggagcgggcggcgtccgcggaagaggctgcagcc
gccgtcgccgggcggctggagcaagctggcgcggcgctggaagccgcgctccgggagcgg
gagctgcaccggctgtcgctggcgctctcccgcgagctgcgggacggggctccgtgcccc
gtgtgcggcagcgagcatcatccggcgccggcatcgctgcagggcggcgaagaagatctg
gcggtagagcggaagcttcaggacgtgaagacgttgacggcgcgcgcgcttgaggctcgc
ggcatgctgcggagcctgcgggagcaggaccgcgcttggctggagcaggtgtacggtgaa
tccggctccctctccgggactcctgccgctgcgggcgcttcgctggccgaagtcgggcaa
gagatccccggattaaccgaaattgcagctgccttgagccaagcagcgagctccgactta
ttagccgatggagacgcagtttcttccgcatggccggaagaaactgccgtagcggagctt
gaagaacagcttgcaggattgcagagctgctctcgggatctgcggcgccgggcggtacag
tggcaggaggaagaccgtcaggcgcagcagcgtctgctgaaggaagccgccgacgccgaa
gctgcgcgaagctgggaagaacaaacggcggccaaggcggaggaactgaagcggcagctt
ttgttcttgcgtcaggaatgggagcggcggtttcctcagcttgcgccgggcgaagcggag
caagcctaccgcgagctgcggcgcaaggatgaagaagccgaggaaatcagaggcaggctg
gacatcagcgtgaagtttctggacgagaagagcgcttccgtacagctgctgcaggacaga
atttccgagctggataaggaactggccggctggatggcgcagcatacgggcaaagaggag
ctgctgcgcgagaaagaacagcggctgctgcaatggacggaagggcattcagccggttct
cttctggcggaatgcgagcggcgtctgcaggagctgcagacggccgcagaggaaggcagg
cgccgtaaccgcgctgccgccgacagggcgcagcaggatgccagagaggcggcgatcgca
cgccaggcagcggattccgcccgtgagcactatgccgccgcagctgcgaactgggaagaa
agccttgcttcttcatcgtttgcttcagccgctgaagccgaagaagcggcgctggatgcg
ggagaacgcgaggcggcttcctcgcgtgtgcgggcgcaccgtgacggcgaggcggaggtc
agcgcgcagcttcgccacatcgaagagaggctcggcggcgacgcggtgaccgaggacgag
tggcgggactgcgagaacgagctccggcagtgcaaggaggatgatgaagctgcgctgcag
gccaaagcgcgcggagagcgtgatctggaggatctgcggcagaggcatatccgctggagt
gagctggaaagcctgcgcgccgggcatgagagcatgcaaagcaagttgtccaagctgcag
tcctgtctgcggggcaatgctttcgttgaatatatcgcggaggagcaattgatgcaggta
tgccaggcggcttctcagcgtctgcgcttcctgagcagacagcgctatgcgctggaggtc
gactccggaggcggctttgttatccgtgacgacggaaacggaggggtcaagcggccggta
tccactttgtcgggcggagagacgttcctaacctcgctgtcgcttgcgctggcgctgtcc
gcgcagattcagcttcgcggacagtatccgctgcaatttttcttcctggacgaaggcttc
ggcacgctggaccccgaactgctcgataccgtgatcacatcgcttgaacggctgcataac
gaccagctgtcggttggtattatcagccacgtcccggagctccgggcaaggcttgcccgg
aagctggttgtggtcccagctttaccgggcggagcgggttcaagcatcattttggaaaaa
aattaa
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