Paenibacillus sophorae: KP014_24315
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Entry
KP014_24315 CDS
T07500
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
psop
Paenibacillus sophorae
Brite
KEGG Orthology (KO) [BR:
psop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psop03400
]
KP014_24315
DNA repair and recombination proteins [BR:
psop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KP014_24315
Archaeal homologous recombinant proteins
KP014_24315
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
DUF2379
Motif
Other DBs
NCBI-ProteinID:
QWU18502
UniProt:
A0A1H8R9Y1
LinkDB
All DBs
Position
complement(4997799..4998980)
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AA seq
393 aa
AA seq
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MRILHTGDWHFGRTLEGRSRQKEQEAFVDELVAIAEEERADLIMMAGDVYDSVNPPAAAE
QLFYEAASRLASGGRQLVVIAGNHDQPERVSSVSPLVFGHGITLVGLPASDPVTVRVART
GETARIAALPYPSEARLGELLAEDSDEAGLRFAYSARVGRLMKLLSREFKPDTVNLAMSH
IYVLGGVESDSERPIQVGGAYTVDPSALACGAQYTALGHLHRPQKVKGEGVIRYSGSPLA
YSFSEAGQAKSVTMLELSPGGEAKPEEILLRCGRPLVEWDCAGGLDEVYRWLDEERDANA
FIDLRIRLSEALSMGDIQRLRKAREGIVHIRPVYPEMERELEASLRSRMPVHELFRRFYQ
RQTGGAEPEDSLVELFLELAEEEREGQEAEETL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgcggattttgcatacgggcgactggcattttggccgtacgctggaaggaagaagcagg
cagaaagagcaggaggcgttcgttgacgaactggtcgccattgccgaggaggaacgcgcg
gaccttattatgatggcaggtgacgtctatgactccgtcaatcctccggctgcggccgag
cagttattctatgaagcggcctcaagacttgcatccgggggaaggcaacttgtcgttatc
gctggcaaccatgaccagcctgagcgcgtatcctccgtatccccgcttgtcttcggacac
ggtattacccttgtcggtctgcccgcaagcgatccggtgacggtccgggtagcccggacg
ggggaaactgcgcgtatagcggctcttccgtacccttccgaagcccgtctgggcgagctg
cttgccgaagatagcgacgaagccggactgcggttcgcttacagcgcgcgtgtaggccgc
ctgatgaagctgttgtcccgggaattcaagcctgacacggtcaatctggcgatgagccat
atttatgtgctgggcggcgtggagagcgactccgagcgcccgatccaggtcggcggggcg
tataccgttgatccttcggcgctggcatgcggcgcgcagtatacggcgctcggccatctc
caccgtccgcagaaggtcaagggagaaggggttatccggtacagcggctctccgctggcg
tacagtttctcggaggcgggccaggccaagtccgtcacgatgcttgaactctccccggga
ggggaggcgaagccggaagaaattctgctgcgctgcggacgtcccctggtggagtgggac
tgcgcggggggactggatgaagtataccggtggcttgacgaggagagggacgccaatgcg
ttcatcgatctgagaatccgcctaagcgaggcgctgtcgatgggagatattcagcggttg
cgtaaggcgcgggaaggtattgtacatatccgcccggtctatccggagatggaacgtgaa
ctggaagcgtccctccgctctcggatgccggtgcatgagctgttcagaaggttctaccag
cggcagaccgggggagcggagccggaagacagcctagtggagctgtttctggaactggcg
gaggaagaacgtgagggacaggaagcggaggagaccttatga
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